Pre_GI: BLASTN Hits

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Query: NC_013929:1584906 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 1584906, End: 1604154, Length: 19249

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:85945008594500861384119342Streptomyces coelicolor A3(2), complete genome01086BLASTN svgBLASTP svg
NC_003888:7028165*7028165706572937565Streptomyces coelicolor A3(2), complete genome01086BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-87331BLASTN svgBLASTP svg
NC_013131:3473843*3473843349585522013Catenulispora acidiphila DSM 44928, complete genome7e-56226BLASTN svgBLASTP svg
NC_018750:20052292005229203059225364Streptomyces venezuelae ATCC 10712, complete genome6e-47196BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-45190BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome3e-36161BLASTN svgBLASTP svg
NC_013595:4951396*4951396497512223727Streptosporangium roseum DSM 43021, complete genome8e-34153BLASTN svgBLASTP svg
NC_015953:17564931756493177842421932Streptomyces sp. SirexAA-E chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_021177:11871011871013659917890Streptomyces fulvissimus DSM 40593, complete genome1e-29139BLASTN svgBLASTP svg
NC_003888:23059012305901232945223552Streptomyces coelicolor A3(2), complete genome3e-27131BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_015957:51099025109902512826818367Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_013947:33471743347174338411536942Stackebrandtia nassauensis DSM 44728 chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_010572:80226980226982859326325Streptomyces griseus subsp. griseus NBRC 13350, complete genome7e-19103BLASTN svgBLASTP svg
NC_014218:1163513*1163513118653823026Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_008537:12500125003067618177Arthrobacter sp. FB24 plasmid 1, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_003888:85699628569962858809918138Streptomyces coelicolor A3(2), complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014210:61850061850064662528126Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009142:5647737*5647737567459926863Saccharopolyspora erythraea NRRL 2338, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015656:132633*13263316991437282Frankia symbiont of Datisca glomerata chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_018750:13900291390029140825618228Streptomyces venezuelae ATCC 10712, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008271:11995711995713933819382Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_008060:2913671*2913671294708933419Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence2e-0971.9BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013595:5176000*5176000519869322694Streptosporangium roseum DSM 43021, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-0765.9BLASTN svgBLASTP svg
NC_007952:31960853196085323399537911Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-0765.9BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007645:38704663870466392303252567Hahella chejuensis KCTC 2396, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010002:1145951*1145951116748921539Delftia acidovorans SPH-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete6e-0763.9BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015656:2900730*2900730292259921870Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008786:32917003291700331510623407Verminephrobacter eiseniae EF01-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008541:19312661931266195576724502Arthrobacter sp. FB24 chromosome 1, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_009664:37189273718927374705528129Kineococcus radiotolerans SRS30216, complete genome9e-0660BLASTN svgBLASTP svg
NC_010572:28435892843589286504421456Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-0660BLASTN svgBLASTP svg
NC_012669:969669696612177224807Beutenbergia cavernae DSM 12333, complete genome9e-0660BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015953:47934844793484481122917746Streptomyces sp. SirexAA-E chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome9e-0660BLASTN svgBLASTP svg