Pre_GI Gene

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Host: NC_010572 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010572:2843589 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
284358928448631275putative peptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
28448532845830978putative peptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
28458442846764921putative peptide ABC transporter permease proteinQuickGO ontologyBLASTP
28468142847737924putative peptide ABC transporter permease proteinQuickGO ontologyBLASTP
284794728495811635putative peptide ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
284974728508651119putative peptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
285088228518921011putative peptide ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
28519522852905954putative peptide ABC transporter permease proteinQuickGO ontologyBLASTP
28528982853827930putative peptide ABC transporter permease proteinQuickGO ontologyBLASTP
285395628555751620putative peptide ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
285623028581041875putative GTP-binding elongation factorQuickGO ontologyBLASTP
285848228609502469putative lipoproteinQuickGO ontologyBLASTP
286129728623911095putative LacI-family transcriptional regulatorQuickGO ontologyBLASTP
286248328634961014putative acetyl esteraseQuickGO ontologyBLASTP
286379728650441248putative ABC transporter substrate-binding proteinQuickGO ontologyBLASTP