Query: NC_013199:1966334 Lactobacillus rhamnosus Lc 705, complete genome
Start: 1966334, End: 1989223, Length: 22890
Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_014334:1848340* | 1848340 | 1872199 | 23860 | Lactobacillus casei str. Zhang chromosome, complete genome | 0 | 1532 | BLASTN svg | BLASTP svg |
NC_010999:2059738 | 2059738 | 2082247 | 22510 | Lactobacillus casei, complete genome | 0 | 1530 | BLASTN svg | BLASTP svg |
NC_013199:2426686 | 2426686 | 2446600 | 19915 | Lactobacillus rhamnosus Lc 705, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_013199:2536705* | 2536705 | 2556404 | 19700 | Lactobacillus rhamnosus Lc 705, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
NC_013198:298000* | 298000 | 320134 | 22135 | Lactobacillus rhamnosus GG, complete genome | 2e-34 | 155 | BLASTN svg | BLASTP svg |
NC_013199:1886271* | 1886271 | 1907836 | 21566 | Lactobacillus rhamnosus Lc 705, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_013199:1150000 | 1150000 | 1173992 | 23993 | Lactobacillus rhamnosus Lc 705, complete genome | 6e-32 | 147 | BLASTN svg | BLASTP svg |
NC_013198:1095591 | 1095591 | 1129615 | 34025 | Lactobacillus rhamnosus GG, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_013199:2386924 | 2386924 | 2411116 | 24193 | Lactobacillus rhamnosus Lc 705, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_013198:511795 | 511795 | 535270 | 23476 | Lactobacillus rhamnosus GG, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_013199:1407742* | 1407742 | 1430099 | 22358 | Lactobacillus rhamnosus Lc 705, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_013198:2458080 | 2458080 | 2479009 | 20930 | Lactobacillus rhamnosus GG, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_012470:1061392 | 1061392 | 1080349 | 18958 | Streptococcus equi subsp. zooepidemicus, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012673:2152639* | 2152639 | 2173718 | 21080 | Exiguobacterium sp. AT1b, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010999:2450974* | 2450974 | 2475974 | 25001 | Lactobacillus casei, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |