Pre_GI: BLASTN Hits

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Query: NC_013198:1095591 Lactobacillus rhamnosus GG, complete genome

Start: 1095591, End: 1129615, Length: 34025

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013199:84500084500087770632707Lactobacillus rhamnosus Lc 705, complete genome05878BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome05011BLASTN svgBLASTP svg
NC_008526:19247611924761195064625886Lactobacillus casei ATCC 334, complete genome02789BLASTN svgBLASTP svg
NC_010999:12452391245239126533120093Lactobacillus casei, complete genome02103BLASTN svgBLASTP svg
NC_010999:56191456191459079528882Lactobacillus casei, complete genome2e-128468BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome5e-126460BLASTN svgBLASTP svg
NC_013198:298000*29800032013422135Lactobacillus rhamnosus GG, complete genome1e-30143BLASTN svgBLASTP svg
NC_013199:24266862426686244660019915Lactobacillus rhamnosus Lc 705, complete genome1e-30143BLASTN svgBLASTP svg
NC_013199:1966334*1966334198922322890Lactobacillus rhamnosus Lc 705, complete genome2e-29139BLASTN svgBLASTP svg
NC_013199:1407742*1407742143009922358Lactobacillus rhamnosus Lc 705, complete genome8e-26127BLASTN svgBLASTP svg
NC_013199:2536705*2536705255640419700Lactobacillus rhamnosus Lc 705, complete genome1e-18103BLASTN svgBLASTP svg
NC_013199:1886271*1886271190783621566Lactobacillus rhamnosus Lc 705, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_019968:8397*83973417325777Prevotella dentalis DSM 3688 chromosome 2, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_013198:24580802458080247900920930Lactobacillus rhamnosus GG, complete genome3e-0765.9BLASTN svgBLASTP svg