Pre_GI: BLASTN Hits

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Query: NC_012660:2143376 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2143376, End: 2203166, Length: 59791

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome0946BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome4e-97365BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome1e-62250BLASTN svgBLASTP svg
NC_014323:46656104665610471710351494Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-55226BLASTN svgBLASTP svg
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-47200BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-47200BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome1e-47200BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-45192BLASTN svgBLASTP svg
NC_004578:38498353849835387260722773Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-45192BLASTN svgBLASTP svg
NC_014532:15794191579419162013440716Halomonas elongata DSM 2581, complete genome1e-41180BLASTN svgBLASTP svg
NC_012880:27787952778795280217023376Dickeya dadantii Ech703, complete genome4e-41178BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome4e-41178BLASTN svgBLASTP svg
NC_010002:2293670*2293670231767724008Delftia acidovorans SPH-1, complete genome7e-40174BLASTN svgBLASTP svg
NC_015563:5162177*5162177518611723941Delftia sp. Cs1-4 chromosome, complete genome7e-40174BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-38170BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome1e-38170BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome4e-38168BLASTN svgBLASTP svg
NC_009512:32825003282500331588733388Pseudomonas putida F1, complete genome4e-38168BLASTN svgBLASTP svg
NC_015740:11063311063313313122499Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-31145BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome4e-29139BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-28135BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome6e-25125BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome1e-22117BLASTN svgBLASTP svg
NC_004578:4708220*4708220473152123302Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-19107BLASTN svgBLASTP svg
NC_015379:3736500*3736500376722330724Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-18103BLASTN svgBLASTP svg
NC_013592:27033272703327272585222526Dickeya dadantii Ech586, complete genome2e-18103BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1697.6BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_011958:1031592*1031592107050538914Rhodobacter sphaeroides KD131 chromosome 2, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_010170:1498253*1498253154638148129Bordetella petrii, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_010170:1324758*1324758137344648689Bordetella petrii, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_013739:2106662*2106662213745830797Conexibacter woesei DSM 14684, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1179.8BLASTN svgBLASTP svg
NC_004463:18497184974626527769Bradyrhizobium japonicum USDA 110, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_007086:24770402477040251517738138Xanthomonas campestris pv. campestris str. 8004, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_010688:2781624*2781624283409952476Xanthomonas campestris pv. campestris, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1077.8BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1077.8BLASTN svgBLASTP svg
NC_015856:34369513436951346108124131Collimonas fungivorans Ter331 chromosome, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_007005:17054061705406172883623431Pseudomonas syringae pv. syringae B728a, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_008782:2326439*2326439236857442136Acidovorax sp. JS42, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_011894:95789795789798052222626Methylobacterium nodulans ORS 2060, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_020181:33288443328844335909930256Enterobacter aerogenes EA1509E, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_013421:17807221780722180552624805Pectobacterium wasabiae WPP163, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010571:2041277*2041277206910427828Opitutus terrae PB90-1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_004578:39211993921199394421523017Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-0661.9BLASTN svgBLASTP svg