Pre_GI: BLASTN Hits

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Query: NC_010610:1178430 Lactobacillus fermentum IFO 3956, complete genome

Start: 1178430, End: 1228977, Length: 50548

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome03207BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome03188BLASTN svgBLASTP svg
NC_010610:90845290845293309924648Lactobacillus fermentum IFO 3956, complete genome03156BLASTN svgBLASTP svg
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome03009BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02609BLASTN svgBLASTP svg
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome02383BLASTN svgBLASTP svg
NC_010610:10750010750013485227353Lactobacillus fermentum IFO 3956, complete genome02260BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome02204BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome02089BLASTN svgBLASTP svg
NC_008497:32160321605098118822Lactobacillus brevis ATCC 367, complete genome01818BLASTN svgBLASTP svg
NC_013198:1030970*1030970105037019401Lactobacillus rhamnosus GG, complete genome01057BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome01029BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome0926BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome0918BLASTN svgBLASTP svg
NC_010999:1381497*1381497140718925693Lactobacillus casei, complete genome0918BLASTN svgBLASTP svg
NC_015602:19496101949610197209922490Lactobacillus kefiranofaciens ZW3 chromosome, complete genome0914BLASTN svgBLASTP svg
NC_015428:21724217244030818585Lactobacillus buchneri NRRL B-30929 chromosome, complete genome0910BLASTN svgBLASTP svg
NC_008528:33126033126035463323374Oenococcus oeni PSU-1, complete genome0902BLASTN svgBLASTP svg
NC_008525:56100056100058709926100Pediococcus pentosaceus ATCC 25745, complete genome0886BLASTN svgBLASTP svg
NC_008497:1575884*1575884159946023577Lactobacillus brevis ATCC 367, complete genome0678BLASTN svgBLASTP svg
NC_014727:20363402036340205433517996Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,6e-114420BLASTN svgBLASTP svg
NC_018528:19320001932000197009938100Lactobacillus helveticus R0052 chromosome, complete genome3e-103385BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome9e-39170BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome6e-37165BLASTN svgBLASTP svg
NC_008530:1454118*1454118148974235625Lactobacillus gasseri ATCC 33323, complete genome8e-33151BLASTN svgBLASTP svg
NC_018528:18067611806761183455627796Lactobacillus helveticus R0052 chromosome, complete genome2e-27133BLASTN svgBLASTP svg
NC_014106:24483124483126509920269Lactobacillus crispatus ST1, complete genome1e-19107BLASTN svgBLASTP svg
NC_015975:92381292381294625822447Lactobacillus ruminis ATCC 27782 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013520:53380353380355342119619Veillonella parvula DSM 2008, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014334:1775781*1775781179812122341Lactobacillus casei str. Zhang chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_008526:1822000*1822000184089018891Lactobacillus casei ATCC 334, complete genome6e-0661.9BLASTN svgBLASTP svg