Query: NC_009512:3334579 Pseudomonas putida F1, complete genome
Start: 3334579, End: 3362674, Length: 28096
Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010501:3671517 | 3671517 | 3704599 | 33083 | Pseudomonas putida W619, complete genome | 0 | 2531 | BLASTN svg | BLASTP svg |
NC_015733:2581324 | 2581324 | 2634334 | 53011 | Pseudomonas putida S16 chromosome, complete genome | 0 | 1590 | BLASTN svg | BLASTP svg |
NC_007492:3462929* | 3462929 | 3509406 | 46478 | Pseudomonas fluorescens PfO-1, complete genome | 2e-75 | 291 | BLASTN svg | BLASTP svg |
NC_012660:2045398* | 2045398 | 2108496 | 63099 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 4e-55 | 224 | BLASTN svg | BLASTP svg |
NC_008027:2051821* | 2051821 | 2073338 | 21518 | Pseudomonas entomophila L48, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_015740:2407500* | 2407500 | 2446827 | 39328 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 3e-31 | 145 | BLASTN svg | BLASTP svg |
NC_002947:2809591* | 2809591 | 2832649 | 23059 | Pseudomonas putida KT2440, complete genome | 7e-29 | 137 | BLASTN svg | BLASTP svg |
NC_008463:5313527 | 5313527 | 5355289 | 41763 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
NC_015410:3209954* | 3209954 | 3231201 | 21248 | Pseudomonas mendocina NK-01 chromosome, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_008463:2467219* | 2467219 | 2503392 | 36174 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 3e-25 | 125 | BLASTN svg | BLASTP svg |
NC_011770:2499432* | 2499432 | 2556972 | 57541 | Pseudomonas aeruginosa LESB58, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_002516:3079850* | 3079850 | 3106752 | 26903 | Pseudomonas aeruginosa PAO1, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009434:2577717* | 2577717 | 2596434 | 18718 | Pseudomonas stutzeri A1501, complete genome | 9e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_021150:2026496* | 2026496 | 2046646 | 20151 | Azotobacter vinelandii CA6, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_012560:2026483* | 2026483 | 2046633 | 20151 | Azotobacter vinelandii DJ, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_009512:3618055* | 3618055 | 3638599 | 20545 | Pseudomonas putida F1, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_007645:4677965* | 4677965 | 4695914 | 17950 | Hahella chejuensis KCTC 2396, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_010002:4572573* | 4572573 | 4618583 | 46011 | Delftia acidovorans SPH-1, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_011662:1017933 | 1017933 | 1045158 | 27226 | Thauera sp. MZ1T, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_012660:4558122* | 4558122 | 4592341 | 34220 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007492:2203220* | 2203220 | 2224173 | 20954 | Pseudomonas fluorescens PfO-1, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_004129:2328491* | 2328491 | 2361230 | 32740 | Pseudomonas fluorescens Pf-5, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008782:1308007 | 1308007 | 1327162 | 19156 | Acidovorax sp. JS42, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_004129:5373886 | 5373886 | 5452599 | 78714 | Pseudomonas fluorescens Pf-5, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_010170:1417615 | 1417615 | 1441654 | 24040 | Bordetella petrii, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018691:3525430* | 3525430 | 3581627 | 56198 | Alcanivorax dieselolei B5 chromosome, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018691:3496420 | 3496420 | 3520544 | 24125 | Alcanivorax dieselolei B5 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014931:4234288* | 4234288 | 4264967 | 30680 | Variovorax paradoxus EPS chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010170:1152131 | 1152131 | 1176694 | 24564 | Bordetella petrii, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010120:609323* | 609323 | 637032 | 27710 | Neisseria meningitidis 053442, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008781:2981868* | 2981868 | 3004658 | 22791 | Polaromonas naphthalenivorans CJ2, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008767:613394* | 613394 | 639893 | 26500 | Neisseria meningitidis FAM18, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003112:673772* | 673772 | 695164 | 21393 | Neisseria meningitidis MC58, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |