Pre_GI: BLASTN Hits

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Query: NC_008463:1912348 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1912348, End: 1954182, Length: 41835

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008570:2216736*2216736227194055205Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome01199BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome01017BLASTN svgBLASTP svg
NC_020181:3585898*3585898362589840001Enterobacter aerogenes EA1509E, complete genome9e-165589BLASTN svgBLASTP svg
NC_005773:1851116*1851116187559924484Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-136496BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome1e-126462BLASTN svgBLASTP svg
NC_007705:15833731583373160836624994Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome2e-73285BLASTN svgBLASTP svg
NC_012721:71088771088773446523579Burkholderia glumae BGR1 chromosome 2, complete genome3e-66262BLASTN svgBLASTP svg
NC_014532:75280775280777109918293Halomonas elongata DSM 2581, complete genome1e-28137BLASTN svgBLASTP svg
NC_010002:15845001584500161170527206Delftia acidovorans SPH-1, complete genome1e-25127BLASTN svgBLASTP svg
NC_008463:31688373168837319814929313Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-25127BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence1e-22117BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome2e-21113BLASTN svgBLASTP svg
NC_009074:2914053*2914053293925825206Burkholderia pseudomallei 668 chromosome I, complete sequence4e-19105BLASTN svgBLASTP svg
NC_015379:31755003175500319347517976Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-18101BLASTN svgBLASTP svg
NC_013889:32511832511834919724080Thioalkalivibrio sp. K90mix chromosome, complete genome6e-18101BLASTN svgBLASTP svg
NC_010995:17490541749054177773928686Cellvibrio japonicus Ueda107, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_009439:63719363719366076223570Pseudomonas mendocina ymp, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_006396:2057209*2057209208818030972Haloarcula marismortui ATCC 43049 chromosome I, complete sequence6e-1591.7BLASTN svgBLASTP svg
NC_012029:904780*90478093723732458Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015663:47674434767443479659929157Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_020181:73447773447775586321387Enterobacter aerogenes EA1509E, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete5e-1281.8BLASTN svgBLASTP svg
NC_006513:15470921547092156587718786Azoarcus sp. EbN1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008340:2614000*2614000263940025401Alkalilimnicola ehrlichei MLHE-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009801:1296488*1296488132313526648Escherichia coli E24377A, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011751:14460731446073147872932657Escherichia coli UMN026 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015410:70994770994773208122135Pseudomonas mendocina NK-01 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015138:2025000*2025000204785422855Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete8e-1177.8BLASTN svgBLASTP svg
NC_014221:68753768753771209924563Truepera radiovictrix DSM 17093 chromosome, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_012559:2854640*2854640288043025791Laribacter hongkongensis HLHK9, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_007510:19598831959883201803458152Burkholderia sp. 383 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_013223:343344*34334437097827635Desulfohalobium retbaense DSM 5692, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
AP010958:1339263*1339263136273323471Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-0971.9BLASTN svgBLASTP svg
CP002185:1298675*1298675132326124587Escherichia coli W, complete genome5e-0971.9BLASTN svgBLASTP svg
CP002516:2786000*2786000281204426045Escherichia coli KO11, complete genome5e-0971.9BLASTN svgBLASTP svg
CU928145:1300863*1300863132330622444Escherichia coli 55989 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
CU928160:1232510*1232510125609923590Escherichia coli IAI1 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_004431:14439681443968146977025803Escherichia coli CFT073, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_007946:12805081280508130218721680Escherichia coli UTI89, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008095:60521396052139608087828740Myxococcus xanthus DK 1622, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008253:12284851228485125292524441Escherichia coli 536, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008563:12178041217804124159923796Escherichia coli APEC O1, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009800:1254409*1254409127914624738Escherichia coli HS, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010468:2699000*2699000272285223853Escherichia coli ATCC 8739, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010473:1245284*1245284127191826635Escherichia coli str. K-12 substr. DH10B, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010658:1193225*1193225121671123487Shigella boydii CDC 3083-94, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011748:1300863*1300863132330622444Escherichia coli 55989, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_008314:1465643*1465643151598150339Ralstonia eutropha H16 chromosome 2, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_013282:25827202582720260756224843Cronobacter turicensis, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013446:26235282623528264731923792Comamonas testosteroni CNB-2, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_018868:282738*28273830817025433Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020211:29851572985157300925724101Serratia marcescens WW4, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_009138:66800066800069732929330Herminiimonas arsenicoxydans, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008702:25205002520500255173231233Azoarcus sp. BH72, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008340:420126*42012644865428529Alkalilimnicola ehrlichei MLHE-1, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_018750:51144345114434513594121508Streptomyces venezuelae ATCC 10712, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_019964:26809352680935270505924125Halovivax ruber XH-70, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007948:46206614620661464325222592Polaromonas sp. JS666, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010498:1995500*1995500202472729228Escherichia coli SMS-3-5, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011757:577611*57761160454026930Methylobacterium chloromethanicum CM4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013530:16492141649214168158732374Xylanimonas cellulosilytica DSM 15894, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007963:1370903*1370903139119320291Chromohalobacter salexigens DSM 3043, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010681:12345001234500126213227633Burkholderia phytofirmans PsJN chromosome 1, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_010998:11105211105213523024179Rhizobium etli CIAT 652 plasmid pA, complete sequence5e-0661.9BLASTN svgBLASTP svg
NC_012912:64736964736967143624068Dickeya zeae Ech1591, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014831:329983*32998335731327331Thermaerobacter marianensis DSM 12885 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome5e-0661.9BLASTN svgBLASTP svg