Query: NC_008253:2198583 Escherichia coli 536, complete genome
Start: 2198583, End: 2217781, Length: 19199
Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_004431:2444972 | 2444972 | 2468099 | 23128 | Escherichia coli CFT073, complete genome | 0 | 36790 | BLASTN svg | BLASTP svg |
NC_006905:2235607 | 2235607 | 2264363 | 28757 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 0 | 1287 | BLASTN svg | BLASTP svg |
NC_011149:2179592 | 2179592 | 2207435 | 27844 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 0 | 1271 | BLASTN svg | BLASTP svg |
NC_004631:799810 | 799810 | 831689 | 31880 | Salmonella enterica subsp. enterica serovar Typhi Ty2, complete | 0 | 1271 | BLASTN svg | BLASTP svg |
NC_003198:2179688 | 2179688 | 2207428 | 27741 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 0 | 1271 | BLASTN svg | BLASTP svg |
NC_006511:792543 | 792543 | 824578 | 32036 | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC | 0 | 1195 | BLASTN svg | BLASTP svg |
NC_013421:1397841 | 1397841 | 1417288 | 19448 | Pectobacterium wasabiae WPP163, complete genome | 6e-155 | 555 | BLASTN svg | BLASTP svg |
NC_013592:3397304 | 3397304 | 3416950 | 19647 | Dickeya dadantii Ech586, complete genome | 7e-136 | 492 | BLASTN svg | BLASTP svg |
NC_008570:1094442* | 1094442 | 1117329 | 22888 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 1e-106 | 394 | BLASTN svg | BLASTP svg |
NC_003143:3191246 | 3191246 | 3212755 | 21510 | Yersinia pestis CO92, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_004088:1510467 | 1510467 | 1533092 | 22626 | Yersinia pestis KIM, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_005810:3021913* | 3021913 | 3045671 | 23759 | Yersinia pestis biovar Microtus str. 91001, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_006155:3333303 | 3333303 | 3351181 | 17879 | Yersinia pseudotuberculosis IP 32953, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_008149:1440371 | 1440371 | 1463012 | 22642 | Yersinia pestis Nepal516, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_008150:2574794 | 2574794 | 2596328 | 21535 | Yersinia pestis Antiqua, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_010634:3250810 | 3250810 | 3268641 | 17832 | Yersinia pseudotuberculosis PB1/+, complete genome | 1e-103 | 385 | BLASTN svg | BLASTP svg |
NC_015061:3725921 | 3725921 | 3750220 | 24300 | Rahnella sp. Y9602 chromosome, complete genome | 1e-44 | 188 | BLASTN svg | BLASTP svg |
NC_015422:2326942 | 2326942 | 2350465 | 23524 | Alicycliphilus denitrificans K601 chromosome, complete genome | 5e-35 | 157 | BLASTN svg | BLASTP svg |
NC_014910:2045088 | 2045088 | 2068116 | 23029 | Alicycliphilus denitrificans BC chromosome, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_014366:1814000* | 1814000 | 1836848 | 22849 | Gamma proteobacterium HdN1, complete genome | 7e-28 | 133 | BLASTN svg | BLASTP svg |
NC_013194:634039 | 634039 | 654274 | 20236 | Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_006370:768745* | 768745 | 792474 | 23730 | Photobacterium profundum SS9 chromosome 1, complete sequence | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_012962:869295 | 869295 | 892184 | 22890 | Photorhabdus asymbiotica, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_005126:949226 | 949226 | 969885 | 20660 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |