Pre_GI: BLASTN Hits

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Query: NC_007492:3655545 Pseudomonas fluorescens PfO-1, complete genome

Start: 3655545, End: 3686137, Length: 30593

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012660:35731543573154359859925446Pseudomonas fluorescens SBW25 chromosome, complete genome4e-163583BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome3e-136494BLASTN svgBLASTP svg
NC_007492:26293502629350265266523316Pseudomonas fluorescens PfO-1, complete genome3e-136494BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome7e-97363BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome2e-48202BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome2e-44188BLASTN svgBLASTP svg
NC_019673:13847951384795141142926635Saccharothrix espanaensis DSM 44229 complete genome1e-33153BLASTN svgBLASTP svg
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome3e-31145BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome4e-21111BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1385.7BLASTN svgBLASTP svg
NC_015594:214500*21450024065526156Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete1e-1283.8BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1281.8BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1281.8BLASTN svgBLASTP svg
NC_015145:26937492693749273661842870Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,9e-1073.8BLASTN svgBLASTP svg
NC_014118:13311641331164135459923436Burkholderia sp. CCGE1002 chromosome chromosome 2, complete9e-1073.8BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014006:924417*92441794759923183Sphingobium japonicum UT26S chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:132000*13200015230120302Frankia alni ACN14a, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014931:55739425573942559409920158Variovorax paradoxus EPS chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014836:33278332785876525488Desulfurispirillum indicum S5 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007948:5026122*5026122504843922318Polaromonas sp. JS666, complete genome4e-0661.9BLASTN svgBLASTP svg