Query: NC_007492:3655545 Pseudomonas fluorescens PfO-1, complete genome
Start: 3655545, End: 3686137, Length: 30593
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_012660:3573154 | 3573154 | 3598599 | 25446 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 4e-163 | 583 | BLASTN svg | BLASTP svg |
| NC_008027:2397255 | 2397255 | 2421256 | 24002 | Pseudomonas entomophila L48, complete genome | 3e-136 | 494 | BLASTN svg | BLASTP svg |
| NC_007492:2629350 | 2629350 | 2652665 | 23316 | Pseudomonas fluorescens PfO-1, complete genome | 3e-136 | 494 | BLASTN svg | BLASTP svg |
| NC_007492:4310828 | 4310828 | 4337167 | 26340 | Pseudomonas fluorescens PfO-1, complete genome | 7e-97 | 363 | BLASTN svg | BLASTP svg |
| NC_007492:2771021 | 2771021 | 2802048 | 31028 | Pseudomonas fluorescens PfO-1, complete genome | 2e-48 | 202 | BLASTN svg | BLASTP svg |
| NC_007492:1735595 | 1735595 | 1757535 | 21941 | Pseudomonas fluorescens PfO-1, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_019673:1384795 | 1384795 | 1411429 | 26635 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
| NC_008148:2498000 | 2498000 | 2550851 | 52852 | Rubrobacter xylanophilus DSM 9941, complete genome | 3e-31 | 145 | BLASTN svg | BLASTP svg |
| NC_007492:2035761 | 2035761 | 2059553 | 23793 | Pseudomonas fluorescens PfO-1, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
| NC_015733:715947* | 715947 | 749172 | 33226 | Pseudomonas putida S16 chromosome, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_007492:2994036 | 2994036 | 3023113 | 29078 | Pseudomonas fluorescens PfO-1, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_015379:89441* | 89441 | 117816 | 28376 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_015594:214500* | 214500 | 240655 | 26156 | Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013757:2706835 | 2706835 | 2751006 | 44172 | Geodermatophilus obscurus DSM 43160, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007492:3954345 | 3954345 | 3998099 | 43755 | Pseudomonas fluorescens PfO-1, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015379:6023926 | 6023926 | 6047280 | 23355 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015379:6714545 | 6714545 | 6742160 | 27616 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015145:2693749 | 2693749 | 2736618 | 42870 | Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_015379:1151143* | 1151143 | 1182795 | 31653 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_014118:1331164 | 1331164 | 1354599 | 23436 | Burkholderia sp. CCGE1002 chromosome chromosome 2, complete | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_008463:282565* | 282565 | 320736 | 38172 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_014006:924417* | 924417 | 947599 | 23183 | Sphingobium japonicum UT26S chromosome 1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| AC_000091:273325 | 273325 | 301797 | 28473 | Escherichia coli W3110 DNA, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_000913:272071 | 272071 | 301797 | 29727 | Escherichia coli K12, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010473:247429 | 247429 | 272099 | 24671 | Escherichia coli str. K-12 substr. DH10B, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020063:3352516 | 3352516 | 3376292 | 23777 | Enterobacteriaceae bacterium strain FGI 57, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008278:132000* | 132000 | 152301 | 20302 | Frankia alni ACN14a, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_007492:3332839 | 3332839 | 3354179 | 21341 | Pseudomonas fluorescens PfO-1, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_020209:2119845* | 2119845 | 2144574 | 24730 | Pseudomonas poae RE*1-1-14, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014931:5573942 | 5573942 | 5594099 | 20158 | Variovorax paradoxus EPS chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014836:33278 | 33278 | 58765 | 25488 | Desulfurispirillum indicum S5 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007948:5026122* | 5026122 | 5048439 | 22318 | Polaromonas sp. JS666, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |