Pre_GI Gene

Some Help

Host: NC_007948 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007948:5026122 Polaromonas sp. JS666, complete genome

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
50261225027099978TRAP dicarboxylate transporter- DctP subunitQuickGO ontologyBLASTP
50271275027645519Tripartite ATP-independent periplasmic transporter DctQ componentQuickGO ontology
502764250289641323TRAP dicarboxylate transporter- DctM subunitQuickGO ontologyBLASTP
50291555029634480YbaKprolyl-tRNA synthetase associated regionQuickGO ontologyBLASTP
50296955029901207hypothetical proteinBLASTP
502994550309641020Fructose-bisphosphate aldolaseQuickGO ontologyBLASTP
50311845031585402response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
50321865032725540hypothetical proteinBLASTP
503273450339241191hypothetical proteinBLASTP
50339215034760840hypothetical proteinBLASTP
50347725035242471hypothetical proteinBLASTP
50352515035883633hypothetical proteinBLASTP
503593250371461215hypothetical proteinBLASTP
50371435037814672hypothetical proteinBLASTP
50378605038618759hypothetical proteinBLASTP
50387855039162378hypothetical protein
50392385039672435hypothetical protein
50398385040326489mucin-associated surface protein MASPQuickGO ontology
50405305041102573putative transmembrane proteinQuickGO ontologyBLASTP
50414675042198732Aspartate racemaseQuickGO ontologyBLASTP
50424895043415927putative outer membrane proteinQuickGO ontology
504352650446981173FAD dependent oxidoreductaseQuickGO ontologyBLASTP
504511550462361122filamentation induced by cAMP protein FicQuickGO ontologyBLASTP
50464915047435945transcriptional regulator LysR familyQuickGO ontologyBLASTP
50475585048439882Pirin-likeQuickGO ontologyBLASTP