Pre_GI: BLASTN Hits

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Query: NC_005945:754517 Bacillus anthracis str. Sterne, complete genome

Start: 754517, End: 773745, Length: 19229

Host Lineage: Bacillus anthracis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain carries the anthrax toxin plasmid pXO1 but not the capsule plasmid pXO2 and is therefore avirulent but toxigenic. It is the counterpart to the Pasteur strain that carries pXO2 but not pXO1. This strain is often used for vaccine development. Under starvation conditions this group of bacteria initiate a pathway that leads to endospore formation, a process that is thoroughly studied and is a model system for prokaryotic development and differentiation. Spores are highly resistant to heat, cold, dessication, radiation, and disinfectants, and enable the organism to persist in otherwise inhospitable environments. Under more inviting conditions the spores germinate to produce vegetative cells. This organism was the first to be shown to cause disease by Dr. Louis Pasteur (the organism, isolated from sick animals, was grown in the laboratory and then used to infect healthy animals and make them sick). This organism was also the first for which an attenuated strain was developed as a vaccine. Herbivorous animals become infected with the organism when they ingest spores from the soil whereas humans become infected when they come into contact with a contaminated animal. PA/LF and PA/EF complexes are internalized by host cells where the LF (metalloprotease) and EF (calmodulin-dependent adenylate cyclase) components act. At high levels LF induces cell death and release of the bacterium while EF increases host susceptibility to infection and promotes fluid accumulation in the cells.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003030:38716583871658389490323246Clostridium acetobutylicum ATCC 824, complete genome1e-23119BLASTN svgBLASTP svg
NC_013893:54688546887972925042Staphylococcus lugdunensis HKU09-01 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_011772:4638000*4638000466192523926Bacillus cereus G9842, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004722:46456784645678466921723540Bacillus cereus ATCC 14579, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003997:45079394507939452668718749Bacillus anthracis str. Ames, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005945:4508304*4508304453209923796Bacillus anthracis str. Sterne, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005957:4502733*4502733452941126679Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-1385.7BLASTN svgBLASTP svg
NC_006274:4563455*4563455458739323939Bacillus cereus E33L, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007530:45077424507742452659918858Bacillus anthracis str. 'Ames Ancestor', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008600:4509793*4509793453559925807Bacillus thuringiensis str. Al Hakam, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012472:4515909*4515909454171025802Bacillus cereus 03BB102, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014335:44425004442500446047217973Bacillus cereus biovar anthracis str. CI chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_003909:4484278*4484278451179927522Bacillus cereus ATCC 10987, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010184:4532262*4532262455888726626Bacillus weihenstephanensis KBAB4, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_021182:40228944022894404142618533Clostridium pasteurianum BC1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007530:33210333321033334647025438Bacillus anthracis str. 'Ames Ancestor', complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005945:33216003321600334477123172Bacillus anthracis str. Sterne, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003997:33209063320906334634325438Bacillus anthracis str. Ames, complete genome6e-0763.9BLASTN svgBLASTP svg