Pre_GI: BLASTN Hits

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Query: NC_005139:2201820 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2201820, End: 2278101, Length: 76282

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005139:79654679654681991523370Vibrio vulnificus YJ016 chromosome I, complete sequence02847BLASTN svgBLASTP svg
NC_002505:1892430*1892430192509932670Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete01612BLASTN svgBLASTP svg
NC_004605:13854441385444145786672423Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete0793BLASTN svgBLASTP svg
NC_002505:19317501931750195259920850Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete3e-172615BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-145525BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome1e-106396BLASTN svgBLASTP svg
NC_009997:40913714091371411415622786Shewanella baltica OS195, complete genome1e-106396BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-104389BLASTN svgBLASTP svg
NC_015637:32556132556134777622216Vibrio anguillarum 775 chromosome chromosome II, complete sequence2e-99373BLASTN svgBLASTP svg
NC_015633:33800033800035668318684Vibrio anguillarum 775 chromosome chromosome I, complete sequence2e-99373BLASTN svgBLASTP svg
NC_015633:17020001702000172537323374Vibrio anguillarum 775 chromosome chromosome I, complete sequence2e-99373BLASTN svgBLASTP svg
NC_009783:16656101665610168785322244Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence7e-99371BLASTN svgBLASTP svg
NC_002505:86078986078988990629118Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete2e-65260BLASTN svgBLASTP svg
NC_009784:21290692129069215319824130Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence2e-59240BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence4e-48202BLASTN svgBLASTP svg
NC_015637:819233*81923383920119969Vibrio anguillarum 775 chromosome chromosome II, complete sequence2e-43186BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete6e-41178BLASTN svgBLASTP svg
NC_009784:12317911231791125420022410Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence2e-25127BLASTN svgBLASTP svg
NC_009901:15163401516340153887622537Shewanella pealeana ATCC 700345, complete genome4e-20109BLASTN svgBLASTP svg
NC_010102:16165301616530165555739028Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-1799.6BLASTN svgBLASTP svg
NC_009784:15918511591851161450422654Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence4e-1799.6BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete2e-1387.7BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete2e-1387.7BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete6e-1385.7BLASTN svgBLASTP svg
NC_009783:16370001637000165503318034Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_004459:32439873243987327990435918Vibrio vulnificus CMCP6 chromosome I, complete sequence1e-1181.8BLASTN svgBLASTP svg
NC_004460:97373897373899864424907Vibrio vulnificus CMCP6 chromosome II, complete sequence2e-1077.8BLASTN svgBLASTP svg
NC_015276:28520102852010287194819939Marinomonas mediterranea MMB-1 chromosome, complete genome6e-1075.8BLASTN svgBLASTP svg
NC_004757:27300572730057278354453488Nitrosomonas europaea ATCC 19718, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_005966:159232*15923218289723666Acinetobacter sp. ADP1, complete genome9e-0971.9BLASTN svgBLASTP svg
NC_004603:1115134*1115134114139026257Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete6e-0765.9BLASTN svgBLASTP svg
NC_006511:1506915*1506915154594239028Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-0765.9BLASTN svgBLASTP svg
NC_009997:26996442699644272218322540Shewanella baltica OS195, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_009997:51882215188221522795839738Shewanella baltica OS195, complete genome6e-0765.9BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012225:47800478008109933300Brachyspira hyodysenteriae WA1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013592:32630053263005329243329429Dickeya dadantii Ech586, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013791:11525001152500117335420855Bacillus pseudofirmus OF4 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_018678:870648706411077423711Alteromonas macleodii str. 'English Channel 673' chromosome,9e-0661.9BLASTN svgBLASTP svg
NC_015424:24625222462522248308820567Aeromonas veronii B565 chromosome, complete genome9e-0661.9BLASTN svgBLASTP svg
NC_014328:12631391263139128186118723Clostridium ljungdahlii ATCC 49587 chromosome, complete genome9e-0661.9BLASTN svgBLASTP svg
NC_008322:1898000*1898000192173523736Shewanella sp. MR-7, complete genome9e-0661.9BLASTN svgBLASTP svg
NC_004347:34373693437369345870921341Shewanella oneidensis MR-1, complete genome9e-0661.9BLASTN svgBLASTP svg