Pre_GI: BLASTN Hits

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Query: NC_004347:103967 Shewanella oneidensis MR-1, complete genome

Start: 103967, End: 126302, Length: 22336

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011740:1189455*1189455121259923145Escherichia fergusonii ATCC 35469, complete genome3e-46194BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome4e-39170BLASTN svgBLASTP svg
NC_020260:12938601293860132559931740Cronobacter sakazakii Sp291, complete genome5e-26127BLASTN svgBLASTP svg
NC_009778:12222731222273124884426572Enterobacter sakazakii ATCC BAA-894, complete genome2e-22115BLASTN svgBLASTP svg
NC_010498:17004471700447171902918583Escherichia coli SMS-3-5, complete genome3e-21111BLASTN svgBLASTP svg
NC_007954:13841013841016136622957Shewanella denitrificans OS217, complete genome1e-20109BLASTN svgBLASTP svg
NC_002655:20150002015000203595420955Escherichia coli O157:H7 EDL933, complete genome8e-19103BLASTN svgBLASTP svg
NC_002695:20565452056545207693920395Escherichia coli O157:H7 str. Sakai, complete genome8e-19103BLASTN svgBLASTP svg
NC_004337:17836451783645180635922715Shigella flexneri 2a str. 301, complete genome8e-19103BLASTN svgBLASTP svg
NC_004741:18230001823000184104318044Shigella flexneri 2a str. 2457T, complete genome8e-19103BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome8e-19103BLASTN svgBLASTP svg
NC_008258:17846371784637180559020954Shigella flexneri 5 str. 8401, complete genome8e-19103BLASTN svgBLASTP svg
NC_011750:18099431809943183281122869Escherichia coli IAI39 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_014837:33014*330146044127428Pantoea sp. At-9b chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003063:1019674*1019674104446124788Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-1693.7BLASTN svgBLASTP svg
NC_010694:2492378*2492378251782925452Erwinia tasmaniensis, complete genome7e-1693.7BLASTN svgBLASTP svg
CP002185:4035502*4035502406409928598Escherichia coli W, complete genome3e-1591.7BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010067:35381693538169356689828730Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-1591.7BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1591.7BLASTN svgBLASTP svg
NC_011751:4293966*4293966431867224707Escherichia coli UMN026 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009832:110239*11023913543725199Serratia proteamaculans 568, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1487.7BLASTN svgBLASTP svg
NC_008253:3941938*3941938399883856901Escherichia coli 536, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009792:46931524693152471999926848Citrobacter koseri ATCC BAA-895, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010498:4072681*4072681409685324173Escherichia coli SMS-3-5, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015566:69190*691909503025841Serratia sp. AS12 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015567:69190*691909503025841Serratia sp. AS9 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_008027:55850755850758141922913Pseudomonas entomophila L48, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009901:35632643563264358409920836Shewanella pealeana ATCC 700345, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015663:1356982*1356982138951032529Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014924:21081162108116214188933774Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015594:33243233243235009917668Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete7e-0763.9BLASTN svgBLASTP svg
NC_010939:1809446*1809446183198722542Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete7e-0763.9BLASTN svgBLASTP svg