Pre_GI: BLASTN Hits

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Query: NC_002947:8394 Pseudomonas putida KT2440, complete genome

Start: 8394, End: 53737, Length: 45344

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome055330BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome054060BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome025960BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome020020BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome03949BLASTN svgBLASTP svg
NC_020209:4768500*4768500481226743768Pseudomonas poae RE*1-1-14, complete genome02095BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome01830BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome01096BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome01096BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome4e-102381BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome6e-92347BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome3e-60242BLASTN svgBLASTP svg
NC_008313:113975239752Ralstonia eutropha H16 chromosome 1, complete sequence4e-59238BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-55226BLASTN svgBLASTP svg
NC_009092:4585784*4585784461549929716Shewanella loihica PV-4, complete genome2e-54222BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome1e-53220BLASTN svgBLASTP svg
NC_016002:111459914599Pseudogulbenkiania sp. NH8B, complete genome6e-52214BLASTN svgBLASTP svg
NC_007347:1*12859628596Ralstonia eutropha JMP134 chromosome 1, complete sequence9e-51210BLASTN svgBLASTP svg
NC_005085:111651116511Chromobacterium violaceum ATCC 12472, complete genome1e-46196BLASTN svgBLASTP svg
NC_015572:115300753007Methylomonas methanica MC09 chromosome, complete genome6e-46194BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome9e-45190BLASTN svgBLASTP svg
NC_010682:112474724747Ralstonia pickettii 12J chromosome 1, complete sequence8e-42180BLASTN svgBLASTP svg
NC_008702:111506115061Azoarcus sp. BH72, complete genome2e-36163BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome3e-32149BLASTN svgBLASTP svg
NC_011662:114205242052Thauera sp. MZ1T, complete genome1e-31147BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome1e-31147BLASTN svgBLASTP svg
NC_010804:52000*520007319121192Burkholderia multivorans ATCC 17616 chromosome 1, complete5e-31145BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-31145BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome2e-30143BLASTN svgBLASTP svg
NC_009076:75535*7553510652630992Burkholderia pseudomallei 1106a chromosome I, complete sequence7e-30141BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence7e-30141BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-29139BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome3e-29139BLASTN svgBLASTP svg
NC_015677:112102721027Ramlibacter tataouinensis TTB310 chromosome, complete genome4e-28135BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome4e-28135BLASTN svgBLASTP svg
NC_015138:111600416004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete7e-27131BLASTN svgBLASTP svg
NC_007958:498549852839523411Rhodopseudomonas palustris BisB5, complete genome7e-27131BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome4e-25125BLASTN svgBLASTP svg
NC_014323:111610816108Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-22117BLASTN svgBLASTP svg
NC_014733:2851984*2851984287799926016Methylovorus sp. MP688 chromosome, complete genome2e-21113BLASTN svgBLASTP svg
NC_009138:15839881583988160724223255Herminiimonas arsenicoxydans, complete genome2e-21113BLASTN svgBLASTP svg
NC_015856:112197121971Collimonas fungivorans Ter331 chromosome, complete genome6e-21111BLASTN svgBLASTP svg
NC_020260:3931567*3931567395659925033Cronobacter sakazakii Sp291, complete genome3e-20109BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-19105BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome4e-19105BLASTN svgBLASTP svg
NC_011979:4293859*4293859431999926141Geobacter sp. FRC-32, complete genome4e-19105BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome6e-18101BLASTN svgBLASTP svg
NC_008576:4701930*4701930473149929570Magnetococcus sp. MC-1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_012724:1*11851018510Burkholderia glumae BGR1 chromosome 1, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_013854:31263853126385315026623882Azospirillum sp. B510, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_010814:409940992609221994Geobacter lovleyi SZ, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008825:2525380*2525380255303327654Methylibium petroleiphilum PM1, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_014722:115359353593Burkholderia rhizoxinica HKI 454, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_009512:32825003282500331588733388Pseudomonas putida F1, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_013960:16936431693643171517421532Nitrosococcus halophilus Nc4 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_007498:3655304*3655304367749922196Pelobacter carbinolicus DSM 2380, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_018868:61911361911367007150959Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010943:24659762465976248809922124Stenotrophomonas maltophilia K279a, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007644:3229*32292661523387Moorella thermoacetica ATCC 39073, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_013165:3146000*3146000318049934500Slackia heliotrinireducens DSM 20476, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_018665:1*12938529385Exiguobacterium antarcticum B7 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013959:28015572801557282605124495Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015942:31851933185193321099925807Acidithiobacillus ferrivorans SS3 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008578:2431074*2431074245799926926Acidothermus cellulolyticus 11B, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014844:35826773582677360568023004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,5e-0661.9BLASTN svgBLASTP svg