Query: NC_002945:3735141 Mycobacterium bovis AF2122/97, complete genome
Start: 3735141, End: 3760774, Length: 25634
Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_012207:3766978 | 3766978 | 3792614 | 25637 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 0 | 37100 | BLASTN svg | BLASTP svg |
NC_008769:3769065 | 3769065 | 3794701 | 25637 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 0 | 37100 | BLASTN svg | BLASTP svg |
NC_009565:3793976 | 3793976 | 3818690 | 24715 | Mycobacterium tuberculosis F11, complete genome | 0 | 37010 | BLASTN svg | BLASTP svg |
NC_002755:3773734 | 3773734 | 3798448 | 24715 | Mycobacterium tuberculosis CDC1551, complete genome | 0 | 36970 | BLASTN svg | BLASTP svg |
NC_015848:3851230 | 3851230 | 3876717 | 25488 | Mycobacterium canettii CIPT 140010059, complete genome | 0 | 29900 | BLASTN svg | BLASTP svg |
NC_019950:3818000 | 3818000 | 3840147 | 22148 | Mycobacterium canettii CIPT 140060008 complete genome | 0 | 26180 | BLASTN svg | BLASTP svg |
NC_000962:3781501 | 3781501 | 3807573 | 26073 | Mycobacterium tuberculosis H37Rv, complete genome | 0 | 25760 | BLASTN svg | BLASTP svg |
NC_009525:3794000 | 3794000 | 3816251 | 22252 | Mycobacterium tuberculosis H37Ra, complete genome | 0 | 20100 | BLASTN svg | BLASTP svg |
NC_009077:1027357* | 1027357 | 1064555 | 37199 | Mycobacterium sp. JLS, complete genome | 1e-61 | 246 | BLASTN svg | BLASTP svg |
NC_014168:709036* | 709036 | 734931 | 25896 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
NC_002677:491043 | 491043 | 513273 | 22231 | Mycobacterium leprae TN, complete genome | 9e-22 | 113 | BLASTN svg | BLASTP svg |
NC_013947:3785332* | 3785332 | 3840292 | 54961 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008782:2062962* | 2062962 | 2087003 | 24042 | Acidovorax sp. JS42, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_020133:4841932 | 4841932 | 4859924 | 17993 | Mycobacterium liflandii 128FXT, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_002755:831397 | 831397 | 850054 | 18658 | Mycobacterium tuberculosis CDC1551, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_002945:831029 | 831029 | 853656 | 22628 | Mycobacterium bovis AF2122/97, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008769:860670 | 860670 | 879696 | 19027 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009525:830513 | 830513 | 849219 | 18707 | Mycobacterium tuberculosis H37Ra, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009565:833076 | 833076 | 851782 | 18707 | Mycobacterium tuberculosis F11, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012207:831030 | 831030 | 853609 | 22580 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_020133:1443934 | 1443934 | 1466099 | 22166 | Mycobacterium liflandii 128FXT, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012725:97681 | 97681 | 120164 | 22484 | Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009525:3933567 | 3933567 | 3958929 | 25363 | Mycobacterium tuberculosis H37Ra, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_019673:6778401 | 6778401 | 6801159 | 22759 | Saccharothrix espanaensis DSM 44229 complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |