Query: NC_002936:1395432 Dehalococcoides ethenogenes 195, complete genome
Start: 1395432, End: 1419062, Length: 23631
Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria
General Information: Dechlorinates tetrachloroethene. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_013890:103807 | 103807 | 123495 | 19689 | Dehalococcoides sp. GT chromosome, complete genome | 0 | 8647 | BLASTN svg | BLASTP svg |
| NC_007356:51080* | 51080 | 100285 | 49206 | Dehalococcoides sp. CBDB1, complete genome | 0 | 1294 | BLASTN svg | BLASTP svg |
| NC_007356:1165760* | 1165760 | 1211475 | 45716 | Dehalococcoides sp. CBDB1, complete genome | 0 | 1277 | BLASTN svg | BLASTP svg |
| NC_007356:1221500 | 1221500 | 1250002 | 28503 | Dehalococcoides sp. CBDB1, complete genome | 0 | 916 | BLASTN svg | BLASTP svg |
| NC_013552:1240073 | 1240073 | 1263534 | 23462 | Dehalococcoides sp. VS, complete genome | 1e-171 | 611 | BLASTN svg | BLASTP svg |
| NC_002936:285527 | 285527 | 308897 | 23371 | Dehalococcoides ethenogenes 195, complete genome | 6e-140 | 505 | BLASTN svg | BLASTP svg |
| NC_014314:1148000* | 1148000 | 1181880 | 33881 | Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete | 5e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_011959:972798* | 972798 | 999093 | 26296 | Thermomicrobium roseum DSM 5159, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_014168:471000* | 471000 | 494251 | 23252 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_010172:4185904* | 4185904 | 4220750 | 34847 | Methylobacterium extorquens PA1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_011757:4293000* | 4293000 | 4338099 | 45100 | Methylobacterium chloromethanicum CM4, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_012808:4235567* | 4235567 | 4258126 | 22560 | Methylobacterium extorquens AM1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_005071:1903581* | 1903581 | 1926099 | 22519 | Prochlorococcus marinus str. MIT 9313, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_008340:682469* | 682469 | 712260 | 29792 | Alkalilimnicola ehrlichei MLHE-1, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014958:843456* | 843456 | 869437 | 25982 | Deinococcus maricopensis DSM 21211 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_013714:2477638 | 2477638 | 2502768 | 25131 | Bifidobacterium dentium Bd1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_006177:2943259* | 2943259 | 2965942 | 22684 | Symbiobacterium thermophilum IAM 14863, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_006177:280234* | 280234 | 319207 | 38974 | Symbiobacterium thermophilum IAM 14863, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008699:833737* | 833737 | 856640 | 22904 | Nocardioides sp. JS614, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011899:12699* | 12699 | 36742 | 24044 | Halothermothrix orenii H 168, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_007759:585264* | 585264 | 607099 | 21836 | Syntrophus aciditrophicus SB, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_005835:1345790* | 1345790 | 1369527 | 23738 | Thermus thermophilus HB27, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_002755:1095105* | 1095105 | 1115787 | 20683 | Mycobacterium tuberculosis CDC1551, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_002945:1095337* | 1095337 | 1117599 | 22263 | Mycobacterium bovis AF2122/97, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008699:857837 | 857837 | 878063 | 20227 | Nocardioides sp. JS614, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008769:1125567* | 1125567 | 1147637 | 22071 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_009525:1096386* | 1096386 | 1118456 | 22071 | Mycobacterium tuberculosis H37Ra, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_009565:1098847* | 1098847 | 1120293 | 21447 | Mycobacterium tuberculosis F11, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_012207:1097228* | 1097228 | 1117899 | 20672 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013174:23421* | 23421 | 61987 | 38567 | Jonesia denitrificans DSM 20603, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013441:1487058 | 1487058 | 1517691 | 30634 | Gordonia bronchialis DSM 43247, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014814:3926676* | 3926676 | 3948945 | 22270 | Mycobacterium sp. Spyr1 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015312:1265797* | 1265797 | 1336630 | 70834 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015312:848403* | 848403 | 867717 | 19315 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015848:1105892* | 1105892 | 1127326 | 21435 | Mycobacterium canettii CIPT 140010059, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_000962:1095078* | 1095078 | 1115749 | 20672 | Mycobacterium tuberculosis H37Rv, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |