Pre_GI Gene

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Host: NC_013890 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013890:103807 Dehalococcoides sp. GT chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1052911069101620Resolvase domain proteinQuickGO ontologyBLASTP
106907107866960hypothetical proteinBLASTP
108164108718555hypothetical proteinBLASTP
108816109031216transcriptional regulator XRE familyQuickGO ontologyBLASTP
109422109664243hypothetical protein
109706110470765protein of unknown function DUF105QuickGO ontologyBLASTP
110547110999453putative lipoproteinQuickGO ontologyBLASTP
111236111508273reductive dehalogenase anchoring protein putativeQuickGO ontologyBLASTP
1115411129891449reductive dehalogenaseQuickGO ontologyBLASTP
113700113978279transposase IS3IS911 family proteinQuickGO ontologyBLASTP
113999114814816Integrase catalytic regionQuickGO ontologyBLASTP
115548116228681two component transcriptional regulator LuxR familyQuickGO ontologyBLASTP
116754117062309hypothetical proteinBLASTP
11725111839611464-diphosphocytidyl-2C-methyl-D-erythritol synthaseQuickGO ontologyBLASTP
118397119086690hypothetical proteinBLASTP
1191091223213213molybdopterin oxidoreductase Fe4S4 regionQuickGO ontologyBLASTP
1223141234951182Polysulphide reductase NrfDQuickGO ontologyBLASTP