Pre_GI: BLASTP Hits

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Query: NC_017265:1571305:1573512 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 1573512, End: 1573775, Length: 264

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:1735903:174011417401141740890777Yersinia pseudotuberculosis IP 31758 chromosome, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_004088:1851500:185243218524321853208777Yersinia pestis KIM, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_010634:2894631:293014229301422930918777Yersinia pseudotuberculosis PB1/+, complete genomemethyltransferase type 112e-1994.4
NC_006155:2979500:301220030122003012976777Yersinia pseudotuberculosis IP 32953, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_003143:2804500:281896228189622819738777Yersinia pestis CO92, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_008149:2366500:238074623807462381522777Yersinia pestis Nepal516, complete genomepuative trans-aconitate methyltransferase2e-1994.4
NC_005810:2549680:258501625850162585792777Yersinia pestis biovar Microtus str. 91001, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_010159:1818500:183300018330001833776777Yersinia pestis Angola, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_009381:2138625:217117021711702171946777Yersinia pestis Pestoides F chromosome, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_014029:2756500:277128527712852772061777Yersinia pestis Z176003 chromosome, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_017154:2804000:281843528184352819211777Yersinia pestis D106004 chromosome, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_017160:2787637:278984427898442790620777Yersinia pestis D182038 chromosome, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_017168:2941938:294269829426982943474777Yersinia pestis A1122 chromosome, complete genometrans-aconitate 2-methyltransferase2e-1994.4
NC_015563:4773415:477860047786004779406807Delftia sp. Cs1-4 chromosome, complete genometrans-aconitate 2-methyltransferase1e-0755.1
NC_008702:2892605:291301429130142913775762Azoarcus sp. BH72, complete genomeprobable trans-aconitate 2-methyltransferase1e-0652
NC_014910:2015627:203112920311292031920792Alicycliphilus denitrificans BC chromosome, complete genometrans-aconitate 2-methyltransferase3e-0650.4