Pre_GI: BLASTP Hits

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Query: NC_017026:1686500:1695013 Mycobacterium tuberculosis RGTB327 chromosome, complete genome

Start: 1695013, End: 1695279, Length: 267

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019950:1689910:1698752169875216999001149Mycobacterium canettii CIPT 140060008 complete genomeLipopolysaccharide biosynthesis protein RffA2e-44177
NC_012207:1681971:1691962169196216931101149Mycobacterium bovis BCG str. Tokyo 172, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase5e-44176
NC_002945:1680751:1690741169074116918891149Mycobacterium bovis AF2122/97, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase5e-44176
NC_008769:1709078:1719069171906917202171149Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein5e-44176
NC_016804:1679357:1689348168934816904961149Mycobacterium bovis BCG str. Mexico chromosome, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase5e-44176
NC_015848:1708176:171816717181671718607441Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein4e-44176
NC_009525:1685522:169551316955131695953441Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein4e-44176
NC_000962:1684005:169399616939961694544549Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein3e-44176
NC_009565:1688642:169863316986331699175543Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-44176
NC_012943:2707677:271892827189282719470543Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein3e-44176
NC_016768:2704350:271560127156012716143543Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein3e-44176
NC_010612:2777687:2788950278895027900981149Mycobacterium marinum M, complete genomepyridoxal phosphate-dependent enzyme, WecE6e-34142
NC_008702:2942246:2950840295084029519821143Azoarcus sp. BH72, complete genomeaminotransferase2e-22104
NC_008380:855246:8627448627448638591116Rhizobium leguminosarum bv. viciae 3841, complete genomeputative lipopolysaccharide biosynthesis protein1e-2098.2
NC_014973:2894248:2904650290465029057861137Geobacter sp. M18 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase4e-1993.2
NC_016112:3103716:3132649313264931337761128Methylomicrobium alcaliphilum chromosome, complete genomelipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase8e-1682.4
NC_009719:3532587:3555397355539735565331137Parvibaculum lavamentivorans DS-1 chromosome, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase7e-1579.3
NC_013410:2519441:2545567254556725467121146Fibrobacter succinogenes subsp. succinogenes S85 chromosome,TDP-4-oxo-6-deoxy-D-glucose transaminase2e-1477.8
NC_007712:4067500:4082611408261140837321122Sodalis glossinidius str. 'morsitans', complete genomeputative lipopolysaccharide biosynthesis protein2e-1477.8
NC_007796:3379614:3381854338185433830201167Methanospirillum hungatei JF-1, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase4e-1477
NC_014830:532122:5354495354495366031155Intrasporangium calvum DSM 43043 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase1e-1375.1
NC_013595:7109039:7122343712234371235721230Streptosporangium roseum DSM 43021, complete genomeTDP-4-oxo-6-deoxy-D-glucose transaminase6e-1269.7
NC_005139:305420:3136013136013147521152Vibrio vulnificus YJ016 chromosome I, complete sequencelipopolysaccharide biosynthesis protein8e-1269.3
NC_016604:297687:3233773233773245281152Mycobacterium rhodesiae NBB3 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase1e-1065.1
NC_015500:311845:3346893346893358161128Treponema brennaborense DSM 12168 chromosome, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase2e-1064.7
NC_010524:674216:6891266891266902561131Leptothrix cholodnii SP-6, complete genomeTDP-4-keto-6-deoxy-D-glucose transaminase3e-0960.5
NC_006512:551312:5756335756335767751143Idiomarina loihiensis L2TR, complete genomePredicted pyridoxal phosphate-dependent enzyme1e-0858.5
NC_009337:1448607:1452047145204714531591113Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase3e-0857.4
NC_015633:413587:4172874172874184321146Vibrio anguillarum 775 chromosome chromosome I, complete sequencedTDP-4-dehydro-6-deoxy-D-glucose 4-aminotransferase2e-0754.7
NC_008322:1595500:1604416160441616055791164Shewanella sp. MR-7, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase7e-0752.8
NC_016616:49388:7909379093802531161Dechlorosoma suillum PS chromosome, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase1e-0652.4
NC_020063:1659795:1667619166761916687701152Enterobacteriaceae bacterium strain FGI 57, complete genomeUDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase2e-0651.6
NC_010814:794211:8119388119388130441107Geobacter lovleyi SZ, complete genomeGlutamine--scyllo-inositol transaminase2e-0651.6
NC_016002:3704006:3714039371403937151871149Pseudogulbenkiania sp. NH8B, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase1e-0651.6
NC_014121:3399685:3421841342184134229921152Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completePsb23e-0650.8
NC_005071:87907:1102641102641114301167Prochlorococcus marinus str. MIT 9313, complete genomecapsular polysaccharide biosynthesis protein3e-0650.4
NC_015145:4191745:4194556419455641957221167Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomePLP-dependent enzyme possibly involved in cell wall biogenesis3e-0650.4
NC_010645:73573:9486894868960461179Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein4e-0650.4
NC_008609:3119502:3145185314518531463001116Pelobacter propionicus DSM 2379, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase6e-0649.7
NC_016609:8271000:8284235828423582853561122Niastella koreensis GR20-10 chromosome, complete genomeglutamine--scyllo-inositol transaminase6e-0649.7
NC_019673:2671458:2677077267707726781711095Saccharothrix espanaensis DSM 44229 complete genomePleiotropic regulatory protein6e-0649.7
NC_008554:1177199:1195520119552011967131194Syntrophobacter fumaroxidans MPOB, complete genomeDegT/DnrJ/EryC1/StrS aminotransferase6e-0649.3