Pre_GI: BLASTP Hits

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Query: NC_016945:666000:685775 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 685775, End: 686425, Length: 651

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016628:373815:378907378907379542636Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein1e-87322
NC_008570:3220539:322459632245963225249654Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomemultidrug resistance protein A2e-67254
NC_009348:1475955:152526315252631525916654Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein4e-65247
NC_017047:1796000:181563018156301816289660Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-57221
NC_010334:2131939:215320121532012153848648Shewanella halifaxensis HAW-EB4, complete genomeprotein of unknown function DUF4801e-56219
NC_008322:1898000:191579319157931916461669Shewanella sp. MR-7, complete genomeprotein of unknown function DUF4807e-55213
NC_003143:2309500:2312549231254923141591611Yersinia pestis CO92, complete genomeputative oxidoreductase2e-54212
NC_008149:1718000:1721165172116517227751611Yersinia pestis Nepal516, complete genomeoxidoreductase2e-54212
NC_005810:2091930:2094979209497920965891611Yersinia pestis biovar Microtus str. 91001, complete genomeputative oxidoreductase2e-54212
NC_004088:2491303:2505361250536125069711611Yersinia pestis KIM, complete genomevirulence factor2e-54212
NC_008150:1593500:1596837159683715984471611Yersinia pestis Antiqua, complete genomeputative oxidoreductase2e-54212
NC_009381:1205900:1219874121987412214841611Yersinia pestis Pestoides F chromosome, complete genomeoxidoreductase2e-54212
NC_014029:2285323:2299349229934923009591611Yersinia pestis Z176003 chromosome, complete genomeputative oxidoreductase2e-54212
NC_017154:2306421:2309470230947023110801611Yersinia pestis D106004 chromosome, complete genomeputative oxidoreductase2e-54212
NC_017160:2212806:2226848222684822284581611Yersinia pestis D182038 chromosome, complete genomeputative oxidoreductase2e-54212
NC_006155:2378526:238160523816052382306702Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-54211
NC_009708:2347350:236101323610132361714702Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-54211
NC_010634:2297000:229951422995142300215702Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein4e-54211
NC_017265:2213500:222781422278142228635822Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-54211
NC_015422:3836911:385962338596233860312690Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein3e-35148
NC_008543:2696377:272278827227882723681894Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceprotein of unknown function DUF4803e-34145
NC_010995:1749054:177349317734931774149657Cellvibrio japonicus Ueda107, complete genomehypothetical protein3e-32138
NC_013194:4305205:431116743111674311655489Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeprotein of unknown function DUF4802e-1686.3
NC_013194:4305205:430811043081104308328219Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein2e-1272.8