Pre_GI: BLASTP Hits

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Query: NC_016830:6589575:6593292 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6593292, End: 6593996, Length: 705

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:5961096:596479859647985965493696Pseudomonas putida KT2440, complete genomehydrolase, haloacid dehalogenase-like family7e-94343
NC_020209:4549563:455327345532734553968696Pseudomonas poae RE*1-1-14, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 1 and 32e-90331
NC_016147:2820232:285013228501322850851720Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehydrolase3e-35148
NC_012791:2622923:263663226366322637363732Variovorax paradoxus S110 chromosome 1, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 18e-30130
NC_018419:226000:227022227022227738717Secondary endosymbiont of Ctenarytaina eucalypti chromosome,haloacid dehalogenase superfamily enzyme, subfamily IA2e-25115
NC_014541:4167916:418248641824864183193708Ferrimonas balearica DSM 9799 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 15e-22104
NC_005061:647567:648900648900649628729Candidatus Blochmannia floridanus, complete genomeputative hydrolase of the HAD superfamily5e-21101
NC_014909:662500:663066663066663782717Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeputative HAD-superfamily hydrolase1e-1996.7
NC_006624:405966:408815408815409468654Thermococcus kodakarensis KOD1, complete genomehydrolase, HAD superfamily4e-1684.7
NC_008700:312099:333460333460334149690Shewanella amazonensis SB2B, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 1 protein family1e-1583.6
UCMB5137:2054735:210827921082792108989711Bacillus atrophaeus UCMB-5137putative hydrolase9e-1477
NC_014639:1358597:136288413628841363594711Bacillus atrophaeus 1942 chromosome, complete genomehydrolase2e-1376.3
CP002207:1358597:136288413628841363594711Bacillus atrophaeus 1942, complete genomeputative hydrolase2e-1376.3
NC_019673:7951493:795430679543067955043738Saccharothrix espanaensis DSM 44229 complete genomeHAD-superfamily hydrolase, subfamily IA, variant 12e-1376.3
NC_012691:1144715:115767811576781158361684Tolumonas auensis DSM 9187, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 13e-1375.1
NC_014210:2372813:237500823750082375742735Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,HAD-superfamily hydrolase, subfamily IA, variant 15e-1374.7
NC_017190:182449:203273203273203986714Bacillus amyloliquefaciens LL3 chromosome, complete genomehydrolase1e-1273.6
NC_014551:199500:220482220482221195714Bacillus amyloliquefaciens DSM 7, complete genomehydrolase1e-1273.6
NC_017188:177500:198464198464199177714Bacillus amyloliquefaciens TA208 chromosome, complete genomehydrolase1e-1273.2
NC_017191:183500:204374204374205087714Bacillus amyloliquefaciens XH7 chromosome, complete genomeHAD family hydrolase YfnB1e-1273.2
NC_004193:2692136:269393726939372694728792Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-1272.4
NC_020272:3706722:370958937095893710302714Bacillus amyloliquefaciens IT-45, complete genomehydrolase3e-1272
NC_012811:410776:414397414397415077681Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative Hydrolase (HAD superfamily)4e-1271.6
NC_016901:414670:427984427984428721738Shewanella baltica OS678 chromosome, complete genomeHAD superfamily hydrolase4e-1271.6
NC_009997:415808:429122429122429859738Shewanella baltica OS195, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 14e-1271.6
NC_012779:996879:101180810118081012491684Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-1271.2
NC_015690:1967244:197553819755381976284747Paenibacillus mucilaginosus KNP414 chromosome, complete genomehaloacid dehalogenase superfamily enzyme, subfamily IA5e-1271.2
NC_016935:2503071:250675525067552507501747Paenibacillus mucilaginosus 3016 chromosome, complete genomehaloacid dehalogenase superfamily protein5e-1271.2
NC_016641:4727000:473496147349614735644684Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein5e-1271.2
NC_012108:3922511:392624439262443926930687Desulfobacterium autotrophicum HRM2, complete genomeputative (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (DEHC)7e-1270.9
NC_020410:198000:219173219173219886714Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative hydrolase8e-1270.5
NC_014550:3263783:326643532664353267112678Arthrobacter arilaitensis Re117, complete genomehaloacid dehalogenase-like family hydrolase2e-1169.7
NC_000961:372000:419975419975420673699Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1168.9
NC_011750:5045927:505102850510285051705678Escherichia coli IAI39 chromosome, complete genomenucleotidase3e-1168.9
NC_013524:1207845:122795612279561228693738Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-1066.6
NC_015977:2807782:283499528349952835618624Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-1066.6
AP010958:5361207:536318453631845363861678Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted hydrolase1e-1066.6
NC_013353:5361207:536318453631845363861678Escherichia coli O103:H2 str. 12009, complete genomehydrolase1e-1066.6
NC_013716:5141269:514547151454715146148678Citrobacter rodentium ICC168, complete genome5'-nucleotidase (nucleoside 5'-monophosphate phosphohydrolase)1e-1066.6
NC_007498:1611986:162945816294581630162705Pelobacter carbinolicus DSM 2380, complete genomehaloacid dehalogenase2e-1065.9
NC_011899:12699:310733107331786714Halothermothrix orenii H 168, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 12e-1065.9
NC_015474:983468:997063997063997761699Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein3e-1065.5
NC_003413:214120:237626237626238285660Pyrococcus furiosus DSM 3638, complete genomehydrolase related to 2-haloalkanoic acid dehalogenase4e-1065.1
NC_013525:556036:562936562936563637702Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 37e-1064.3
NC_008095:3371673:337167333716733372356684Myxococcus xanthus DK 1622, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 17e-1064.3
NC_017179:281069:282422282422283138717Clostridium difficile BI1, complete genomehydrolase7e-1064.3
NC_003552:1492500:149289714928971493604708Methanosarcina acetivorans C2A, complete genomehaloacid dehalogenase-like hydrolase family protein6e-1064.3
NC_013156:154233:173726173726174412687Methanocaldococcus fervens AG86, complete genomeHAD superfamily (subfamily IA) hydrolase, TIGR022538e-1063.9
NC_014387:719245:735171735171735812642Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeHAD superfamily hydrolase8e-1063.9
NC_008322:373531:377357377357378073717Shewanella sp. MR-7, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 19e-1063.9
NC_005773:4028500:403155340315534032068516Pseudomonas syringae pv. phaseolicola 1448A, complete genomeHAD-superfamily hydrolase, putative1e-0963.5
NC_010723:801215:820206820206820889684Clostridium botulinum E3 str. Alaska E43, complete genomeputative hydrolase1e-0963.2
NC_013406:5020690:504016550401655040836672Paenibacillus sp. Y412MC10 chromosome, complete genomeHAD-superfamily hydrolase2e-0962.8
NC_015711:5250163:527207252720725272755684Myxococcus fulvus HW-1 chromosome, complete genomeHAD family hydrolase3e-0962
NC_013595:41245:499614996150611651Streptosporangium roseum DSM 43021, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 14e-0961.6
NC_010424:1857062:186450718645071865190684Candidatus Desulforudis audaxviator MP104C, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 16e-0961.2
NC_016641:3217201:323691632369163237677762Paenibacillus terrae HPL-003 chromosome, complete genomeHAD-superfamily hydrolase6e-0961.2
NC_009348:2362163:237588923758892376569681Aeromonas salmonicida subsp. salmonicida A449, complete genomeHAD-superfamily hydrolase5e-0961.2
NC_013411:3201331:321710732171073217775669Geobacillus sp. Y412MC61, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 17e-0960.8
NC_014915:3207300:322307632230763223744669Geobacillus sp. Y412MC52 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 17e-0960.8
NC_011658:3680829:368737836873783688001624Bacillus cereus AH187 chromosome, complete genomeHAD superfamily hydrolase2e-0859.7
NC_008596:4104476:413137541313754132064690Mycobacterium smegmatis str. MC2 155, complete genomehaloacid dehalogenase, type II2e-0859.7
NC_014206:3239403:326031332603133260957645Geobacillus sp. C56-T3 chromosome, complete genomeHAD-superfamily hydrolase2e-0859.3
NC_008260:125500:127079127079127909831Alcanivorax borkumensis SK2, complete genomehaloacid dehalogenase-like hydrolase, putative2e-0859.3
NC_011969:3627980:363128336312833631960678Bacillus cereus Q1 chromosome, complete genomehaloacid dehalogenase3e-0858.9
NC_012883:1421644:142600014260001426905906Thermococcus sibiricus MM 739, complete genomeHydrolase, HAD superfamily7e-0857.8
NC_012472:3743473:374677437467743747451678Bacillus cereus 03BB102, complete genomehydrolase, haloacid dehalogenase-like family1e-0757
NC_016779:3660000:366460636646063665283678Bacillus cereus F837/76 chromosome, complete genome2-haloalkanoic acid dehalogenase1e-0757
NC_017208:3897253:390055639005563901233678Bacillus thuringiensis serovar chinensis CT-43 chromosome, completephosphoglycolate phosphatase1e-0756.6
NC_013891:575746:586613586613587317705Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 11e-0756.6
NC_013967:1289458:128945812894581290150693Haloferax volcanii DS2 chromosome, complete genomehaloacid dehalogenase-like hydrolase, putative2e-0756.2
NC_015312:1265797:131455313145531315299747Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeHaloacid dehalogenase domain-containing protein hydrolase2e-0755.8
NC_006361:498305:507019507019507687669Nocardia farcinica IFM 10152, complete genomeputative hydrolase5e-0754.7
NC_013510:329999:338225338225338893669Thermomonospora curvata DSM 43183, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 19e-0753.9
NC_015658:319296:334089334089334775687Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequencehaloacid dehalogenase, type II1e-0653.5
NC_014623:7720828:774050477405047741187684Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeHAD superfamily hydrolase1e-0653.1
NC_009921:1813500:181885018188501819539690Frankia sp. EAN1pec, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 33e-0652