Pre_GI: BLASTP Hits

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Query: NC_016830:4999946:5015781 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5015781, End: 5016344, Length: 564

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2234851:224007122400712240622552Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, lytic enzyme9e-56216
NC_017986:4124335:412990241299024130471570Pseudomonas putida ND6 chromosome, complete genomeglycoside hydrolase family protein1e-54212
NC_015733:1976752:198241519824151982966552Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, lytic enzyme4e-53207
NC_005773:2177184:219379921937992194344546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase7e-51199
NC_004578:3817330:383103838310383831583546Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative2e-50197
NC_005773:2177184:218310721831072183652546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase1e-49196
NC_016002:2037374:205644220564422056984543Pseudogulbenkiania sp. NH8B, complete genomeglycoside hydrolase family protein6e-45180
NC_004578:4432983:444604244460424446575534Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative2e-39162
NC_012660:4558122:457641545764154576948534Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage encoded lysozyme9e-39159
NC_010002:3785313:378740737874073787958552Delftia acidovorans SPH-1, complete genomeputative lysozyme9e-31132
NC_011770:1431740:145211114521111452728618Pseudomonas aeruginosa LESB58, complete genomeCOG3179: Predicted chitinase3e-23107
NC_013592:4295449:431316143131614313787627Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 192e-21102
NC_012912:325913:332536332536333162627Dickeya zeae Ech1591, complete genomeglycoside hydrolase family 192e-2098.6
NC_017325:1897500:189797818979781898946969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein6e-2097.1
NC_017325:1488841:148964314896431490611969Sinorhizobium meliloti SM11 chromosome, complete genomechitinase-like protein3e-1994.7
NC_013282:1200993:122515912251591225785627Cronobacter turicensis, complete genomeUncharacterized protein HI14158e-1993.2
NC_017047:1906000:191830019183001918926627Rahnella aquatilis HX2 chromosome, complete genomeputative endolysin1e-1892.8
NC_011770:860944:881683881683882300618Pseudomonas aeruginosa LESB58, complete genomePredicted chitinase; lytic protein3e-1891.3
NC_009255:1369200:138805713880571388635579Burkholderia vietnamiensis G4 chromosome 2, complete sequenceglycoside hydrolase family protein6e-1890.5
NC_014973:5099543:5124478512447851254881011Geobacter sp. M18 chromosome, complete genomeglycoside hydrolase family 197e-1890.1
NC_016641:1148220:1156074115607411570781005Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein6e-1787
NC_010397:1802724:1809368180936818107411374Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage protein2e-1685.5
NC_010161:1501758:151116715111671511748582Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-1685.5
NC_010161:1324381:133379013337901334371582Bartonella tribocorum CIP 105476, complete genomepeptidoglycan binding protein2e-1685.5
NC_015761:1017301:102522610252261025840615Salmonella bongori NCTC 12419, complete genomebacteriophage protein3e-1684.7
NC_010161:2548254:255766425576642558245582Bartonella tribocorum CIP 105476, complete genomehypothetical protein4e-1684.3
NC_010161:1949637:195948819594881960069582Bartonella tribocorum CIP 105476, complete genomehypothetical protein4e-1684.3
NC_020301:853267:865370865370865978609Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein7e-1683.6
NC_016047:345491:355177355177355635459Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeendopeptidase LytF8e-1683.6
NC_011094:638552:664550664550665164615Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme1e-1582.8
NC_012214:1974500:198840819884081989031624Erwinia pyrifoliae Ep1/96, complete genomeLytic enzyme2e-1581.6
NC_018748:1443176:1454863145486314560471185Emticicia oligotrophica DSM 17448 chromosome, complete genomehypothetical protein7e-1580.1
NC_014168:1724993:1731346173134617328481503Segniliparus rotundus DSM 44985 chromosome, complete genomefamily 19 glycoside hydrolase2e-1478.6
NC_015663:4522109:452715045271504527779630Enterobacter aerogenes KCTC 2190 chromosome, complete genomelytic enzyme1e-1375.9
NC_005085:24623:3211132111342522142Chromobacterium violaceum ATCC 12472, complete genomeprobable hydroxyethylthiazole kinase5e-1270.9
NC_014121:1682638:169633316963331696881549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelytic enzyme1e-1169.3
NC_016612:3314846:333598533359853336533549Klebsiella oxytoca KCTC 1686 chromosome, complete genomelytic enzyme4e-1167.8
NC_012731:2083650:211163421116342112260627Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycoside hydrolase5e-1167.4
NC_009937:958576:961972961972962877906Azorhizobium caulinodans ORS 571, complete genomeputative chitinase5e-1167.4
NC_017025:1761918:176969117696911770404714Flavobacterium indicum GPTSA100-9, complete genomeGlycoside hydrolase family 19, putative chitinase8e-1166.6
NC_018607:2010500:201515420151542015747594Brachyspira pilosicoli B2904 chromosome, complete genomeglycoside hydrolase2e-1065.9
NC_009648:1541699:156536715653671565993627Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative glycoside hydrolase3e-1064.7
NC_013850:2182337:220954522095452210171627Klebsiella variicola At-22 chromosome, complete genomeglycoside hydrolase family 193e-1064.7
NC_013971:3117000:3129058312905831318202763Erwinia amylovora ATCC 49946 chromosome, complete genomechitinase4e-1064.3
NC_013961:629307:6394816394816422432763Erwinia amylovora, complete genomehypothetical protein4e-1064.3
NC_013282:1804909:182501118250111825565555Cronobacter turicensis, complete genomehypothetical protein5e-1064.3
NC_019908:807000:812628812628813203576Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycoside hydrolase family protein5e-1063.9
NC_014150:1497381:150134615013461501939594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 195e-1063.9
NC_014150:1936154:193923519392351939828594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 195e-1063.9
NC_020181:5384015:539721353972135397842630Enterobacter aerogenes EA1509E, complete genomePhage endolysin7e-1063.5
NC_010067:2304313:232964023296402329939300Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-1063.2
NC_011601:2806392:281283928128392813465627Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendolysin1e-0962.8
NC_020181:5217000:522775752277575228383627Enterobacter aerogenes EA1509E, complete genomehypothetical protein9e-0960.1
NC_014150:2560475:256367625636762564269594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-0859.3
NC_003902:3514000:353599035359903536631642Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related lytic enzyme2e-0858.9
NC_017243:58000:613536135361964612Brachyspira intermedia PWS/A chromosome, complete genomeglycoside hydrolase6e-0857.4
NC_014150:1607873:162002416200241620638615Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-0755.5
NC_018604:305957:314155314155314781627Brachyspira pilosicoli WesB complete genomeglycoside hydrolase family 192e-0755.5
NC_014500:4691915:4699276469927647015822307Dickeya dadantii 3937 chromosome, complete genomeEF hand domain-containing protein4e-0754.7
NC_011071:2733438:2736843273684327378501008Stenotrophomonas maltophilia R551-3, complete genomechitinase-like protein2e-0652.4
NC_018604:2871328:288056228805622881140579Brachyspira pilosicoli WesB complete genomeendolysin glycoside hydrolase2e-0652
NC_014330:1324500:133383613338361334414579Brachyspira pilosicoli 95/1000 chromosome, complete genomeendolysin glycoside hydrolase6e-0650.4
NC_019908:1886647:189339118933911893969579Brachyspira pilosicoli P43/6/78 chromosome, complete genomeendolysin glycoside hydrolase7e-0650.4