Pre_GI: BLASTP Hits

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Query: NC_016830:3869572:3940207 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3940207, End: 3940377, Length: 171

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:2143376:215198521519852152215231Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage-like protein5e-22103
NC_009512:3282500:330249833024983302713216Pseudomonas putida F1, complete genomephage transcriptional regulator, AlpA2e-1994
NC_015733:2658337:266372826637282663967240Pseudomonas putida S16 chromosome, complete genomephage transcriptional regulator AlpA6e-1992.8
NC_010170:1324758:135213513521351352347213Bordetella petrii, complete genomeputative transcriptional regulator (phage-related)8e-1992.4
NC_008344:49039:121606121606121818213Nitrosomonas eutropha C91, complete genomephage transcriptional regulator, AlpA1e-1788.2
NC_012691:2614603:262271626227162622955240Tolumonas auensis DSM 9187, complete genomephage transcriptional regulator, AlpA2e-1684.3
NC_007086:2477040:248606124860612486282222Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-1580.9
NC_010688:2781624:279949727994972799718222Xanthomonas campestris pv. campestris, complete genomephage-related regulatory protein2e-1580.9
NC_009138:1974935:198388419838841984096213Herminiimonas arsenicoxydans, complete genomeputative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage3e-1580.5
NC_008782:1510000:151461215146121514824213Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA6e-1579.3
NC_015379:2417312:246348524634852463706222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, AlpA family2e-1478.2
NC_014972:247028:265810265810266025216Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage transcriptional regulator, AlpA1e-1271.6
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA2e-0857.8
NC_009381:1362471:139729913972991397484186Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator2e-0857.8
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator2e-0857.8
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator2e-0857.8
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein2e-0857.8
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator2e-0857.8
NC_010622:249625:279209279209279430222Burkholderia phymatum STM815 chromosome 1, complete sequencephage transcriptional regulator, AlpA2e-0857.8
NC_013421:1819036:184166718416671841861195Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA5e-0856.6
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA6e-0856.2
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein8e-0855.8
NC_010676:2793237:279827727982772798510234Burkholderia phytofirmans PsJN chromosome 2, complete sequencephage transcriptional regulator, AlpA9e-0855.8
NC_003911:2042389:205289020528902053081192Silicibacter pomeroyi DSS-3, complete genomeDNA-binding protein, putative9e-0855.5
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA2e-0754.7
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein2e-0754.7
NC_012912:1701231:171525317152531715447195Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA2e-0754.3
NC_014500:3097362:314293231429323143126195Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein2e-0754.3
NC_020908:1472981:149682614968261497020195Octadecabacter arcticus 238, complete genomeprophage regulatory protein-like protein3e-0753.5
NC_011283:1811000:185314418531441853353210Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family3e-0753.5
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage4e-0753.5
NC_016818:1795576:183513518351351835329195Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator5e-0753.1
NC_015731:1578106:159965415996541599836183Nitrosomonas sp. Is79A3 chromosome, complete genomephage transcriptional regulator AlpA8e-0752.4
NC_005139:796546:813042813042813236195Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator8e-0752.4
NC_011094:638552:652744652744652941198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-0652
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-0652
NC_020304:752012:772470772470772679210Desulfocapsa sulfexigens DSM 10523, complete genomeputative transcriptional regulator1e-0651.6
NC_004578:3849835:386503638650363865278243Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein, putative2e-0650.8
NC_011283:4438500:445473644547364454942207Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family3e-0650.4
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein3e-0650.4
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein3e-0650.4
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage3e-0650.4
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA5e-0650.1
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA5e-0650.1
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA5e-0650.1
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein5e-0650.1
NC_014500:3744705:376114837611483761351204Dickeya dadantii 3937 chromosome, complete genomeputative regulatory protein4e-0650.1
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-0650.1
NC_014923:3968000:397587739758773976080204Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProphage CP4-57 regulatory4e-0650.1
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA5e-0649.7
NC_017047:1906000:190691119069111907213303Rahnella aquatilis HX2 chromosome, complete genomeDNA binding protein7e-0649.3