Pre_GI: BLASTP Hits

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Query: NC_015848:1708176:1714305 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1714305, End: 1714517, Length: 213

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:1686500:169115016911501691362213Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-34144
NC_009565:1688642:169477116947711694983213Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-34144
NC_000962:1684005:169013416901341690346213Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-34144
NC_009525:1685522:169165116916511691863213Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-34144
NC_002755:1684161:169029016902901690502213Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-34144
NC_012943:2707677:272312027231202723332213Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-34144
NC_016768:2704350:271979327197932720005213Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-34144
NC_019950:1689910:169347616934761693688213Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein3e-34143
NC_002945:1680751:168688016868801687071192Mycobacterium bovis AF2122/97, complete genomehypothetical protein1e-29128
NC_012207:1681971:168810016881001688291192Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-29128
NC_008769:1709078:171520717152071715398192Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-29128
NC_016804:1679357:168548616854861685677192Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-29128
NC_021150:201237:204204204204204419216Azotobacter vinelandii CA6, complete genomehypothetical protein3e-1787.4
NC_012560:201237:204204204204204419216Azotobacter vinelandii DJ, complete genomehypothetical protein3e-1787.4
NC_002927:1787633:180566418056641805879216Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1684.7
NC_003296:1461538:148168314816831481934252Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-1684.3
NC_007760:2126956:214600321460032146206204Anaeromyxobacter dehalogenans 2CP-C, complete genomeprotein of unknown function DUF14588e-1165.9
NC_010831:40000:403494034940564216Chlorobium phaeobacteroides BS1, complete genomeprotein of unknown function DUF14582e-1064.3
NC_007517:3524715:354455635445563544777222Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF14584e-0753.5