Pre_GI: BLASTP Hits

Some Help

Query: NC_015848:1708176:1710741 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1710741, End: 1711058, Length: 318

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:1686500:168758016875801687897318Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein6e-46182
NC_019950:1689910:168991016899101690227318Mycobacterium canettii CIPT 140060008 complete genomeConserved protein of unknown function, putative toxin MazF46e-46182
NC_000962:1684005:168657016865701686887318Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein6e-46182
NC_008769:1709078:171164317116431711960318Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein6e-46182
NC_012207:1681971:168453616845361684853318Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein6e-46182
NC_002755:1684161:168672616867261687043318Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein6e-46182
NC_002945:1680751:168331616833161683633318Mycobacterium bovis AF2122/97, complete genomehypothetical protein6e-46182
NC_009525:1685522:168808716880871688404318Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein6e-46182
NC_012943:2707677:272657927265792726896318Mycobacterium tuberculosis KZN 1435 chromosome, complete genometoxin6e-46182
NC_016768:2704350:272325227232522723569318Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein6e-46182
NC_016804:1679357:168192216819221682239318Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein6e-46182
NC_009565:1688642:169120716912071691524318Mycobacterium tuberculosis F11, complete genomehypothetical protein6e-46182