Pre_GI: BLASTP Hits

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Query: NC_015848:1708176:1710442 Mycobacterium canettii CIPT 140010059, complete genome

Start: 1710442, End: 1710744, Length: 303

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:1686500:168728116872811687583303Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein5e-31132
NC_019950:1689910:168961116896111689913303Mycobacterium canettii CIPT 140060008 complete genomeConserved protein of unknown function, putative antitoxin MazE45e-31132
NC_009565:1688642:169090816909081691210303Mycobacterium tuberculosis F11, complete genomehypothetical protein5e-31132
NC_000962:1684005:168627116862711686573303Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein5e-31132
NC_009525:1685522:168778816877881688090303Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein5e-31132
NC_002945:1680751:168301716830171683319303Mycobacterium bovis AF2122/97, complete genomehypothetical protein5e-31132
NC_012943:2707677:272689327268932727195303Mycobacterium tuberculosis KZN 1435 chromosome, complete genomeantitoxin5e-31132
NC_016768:2704350:272356627235662723868303Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein5e-31132
NC_016804:1679357:168162316816231681925303Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein3e-30130
NC_008769:1709078:171134417113441711646303Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein3e-30130
NC_012207:1681971:168423716842371684539303Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein3e-30130
NC_002755:1684161:168642716864271686729303Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein4e-30129