Pre_GI: BLASTP Hits

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Query: NC_015733:4130000:4134778 Pseudomonas putida S16 chromosome, complete genome

Start: 4134778, End: 4135200, Length: 423

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:3987615:399225639922563992669414Pseudomonas putida W619, complete genometranscriptional regulator, MerR family8e-59225
NC_008027:1847040:186647118664711866866396Pseudomonas entomophila L48, complete genometranscriptional regulator2e-53207
NC_013166:82986:944679446794919453Kangiella koreensis DSM 16069, complete genometranscriptional regulator, MerR family8e-38155
NC_008702:2892605:289957428995742900011438Azoarcus sp. BH72, complete genomeprobable redox-sensitive transcriptional activator3e-37153
NC_012724:1308000:132249213224921322923432Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, MerR family protein3e-34143
NC_014623:9089998:909611190961119096548438Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeMerR family transcriptional regulator3e-33140
NC_015731:1578106:160221816022181602658441Nitrosomonas sp. Is79A3 chromosome, complete genomeMarR family transcriptional regulator3e-32137
NC_010410:3719599:372359937235993724003405Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (MerR family)3e-31133
NC_010611:208268:225980225980226384405Acinetobacter baumannii ACICU, complete genomepredicted transcriptional regulator2e-30130
NC_016514:1183356:119649111964911196919429Enterobacter cloacae EcWSU1 chromosome, complete genomemerR family transcriptional Regulator5e-28122
NC_009425:63709:883968839688821426Enterobacter sp. 638 plasmid pENTE01, complete sequenceMerR family transcriptional regulator2e-23107
NC_016109:4088259:410598841059884106383396Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator1e-1168.2
NC_015422:2858228:286535728653572865800444Alicycliphilus denitrificans K601 chromosome, complete genomeMerR family transcriptional regulator2e-0960.8
NC_008782:2857899:286344128634412863956516Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family2e-0960.8
NC_019673:7598026:761095576109557611416462Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, MerR family5e-0959.7
NC_010067:3310336:331693133169313317389459Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0959.3
NC_011894:4911500:492472249247224925156435Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, MerR family6e-0959.3
NC_013792:109203:115508115508115993486Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencemercuric resistance operon regulatory protein MerR2e-0857.8
NC_016616:1091606:109800110980011098429429Dechlorosoma suillum PS chromosome, complete genomeCu(I)-responsive transcriptional regulator2e-0857.8
NC_020181:3585898:360470636047063605164459Enterobacter aerogenes EA1509E, complete genomeRedox-sensitive transcriptional activator SoxR3e-0857.4
NC_008347:174000:190633190633191043411Maricaulis maris MCS10, complete genomeputative transcriptional regulator, MerR family4e-0856.6
NC_008740:257434:280490280490280915426Marinobacter aquaeolei VT8, complete genomeputative transcriptional regulator, MerR family5e-0856.6
NC_006905:4405301:443899744389974439455459Salmonella enterica subsp. enterica serovar Choleraesuis strredox-sensing transcriptional activator SoxR, contains iron-sulfur center for redox-sensing (MerR family)6e-0856.2
NC_011094:4361238:439494043949404395398459Salmonella enterica subsp. enterica serovar Schwarzengrund strredox-sensitive transcriptional activator SoxR6e-0856.2
NC_008702:1432952:147196814719681472363396Azoarcus sp. BH72, complete genomeputative regulatory protein7e-0855.8
NC_011420:69843:929229292293323402Rhodospirillum centenum SW, complete genomeHTH-type transcriptional regulator HmrR9e-0855.5
NC_009040:43791:599605996060382423Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative transcriptional regulator, MerR family2e-0754.7
NC_012483:1408500:144328314432831443693411Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, MerR family2e-0754.3
NC_009656:115390:122118122118122516399Pseudomonas aeruginosa PA7 chromosome, complete genomeHg(II)-responsive transcriptional regulator3e-0753.9
NC_009434:3611738:370624537062453706643399Pseudomonas stutzeri A1501, complete genomeMerR family transcriptional regulator3e-0753.9
NC_011001:2327633:233684423368442337317474Burkholderia cenocepacia J2315 chromosome 2, complete sequenceMerR family regulatory protein3e-0753.9
NC_010125:74904:971789717897711534Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, MerR family4e-0753.5
NC_017904:3084872:309662730966273097076450Mycobacterium sp. MOTT36Y chromosome, complete genometranscriptional regulator5e-0753.1
NC_002927:4392768:441490944149094415373465Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator6e-0752.8
NC_011083:403022:447987447987448451465Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Cu(I)-responsive transcriptional regulator9e-0752.4
NC_011080:383441:405320405320405784465Salmonella enterica subsp. enterica serovar Newport str. SL254,Cu(I)-responsive transcriptional regulator9e-0752.4
NC_011149:361765:383657383657384121465Salmonella enterica subsp. enterica serovar Agona str. SL483,Cu(I)-responsive transcriptional regulator9e-0752.4
NC_012125:373630:395509395509395973465Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator9e-0752.4
NC_003296:140889:159311159311159769459Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN9e-0752.4
NC_018868:619113:639254639254639721468Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeMerR family transcriptional regulator9e-0752.4
NC_011274:376970:398848398848399312465Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator9e-0752.4
NC_007951:4576825:460003546000354600433399Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family8e-0752.4
NC_010172:480000:522568522568523185618Methylobacterium extorquens PA1, complete genomeregulatory protein MerR8e-0752.4
NC_011386:3723019:372685837268583727277420Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, MerR family1e-0652
NC_011662:2374955:238002023800202380475456Thauera sp. MZ1T, complete genometranscriptional regulator, MerR family1e-0652
NC_004129:2609189:262818226281822628571390Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, MerR family1e-0652
NC_016111:5369414:537814953781495378634486Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional activator soxR-like protein1e-0652
NC_006363:36959:583585835858759402Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative transcriptional regulator1e-0652
NC_008314:2611873:262853026285302629084555Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, SoxR-family1e-0651.6
NC_004461:73390:832838328383690408Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-0651.6
NC_002947:4362271:436476643647664365137372Pseudomonas putida KT2440, complete genometranscriptional regulator, MerR family2e-0650.8
NC_015684:2000771:200669720066972007122426Oligotropha carboxidovorans OM5 chromosome, complete genomeMerR family transcriptional regulator2e-0650.8
NC_009439:918534:924888924888925319432Pseudomonas mendocina ymp, complete genomeMerR family transcriptional regulator2e-0650.8
NC_009668:445134:485515485515485955441Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator3e-0650.8
NC_014550:2091797:211753021175302118036507Arthrobacter arilaitensis Re117, complete genomeputative redox-sensitive transcriptional regulator SoxR3e-0650.4
NC_018750:6717315:673387867338786734330453Streptomyces venezuelae ATCC 10712, complete genomeputative transcriptional regulator4e-0650.1
NC_013440:3870697:388797238879723888379408Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, MerR family4e-0650.1
NC_014153:2125551:212955021295502130035486Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, MerR family5e-0649.7
NC_020911:3475096:347754534775453477955411Octadecabacter antarcticus 307, complete genomeputative HTH-type transcriptional regulator6e-0649.7
NC_007498:1848437:186231018623101862723414Pelobacter carbinolicus DSM 2380, complete genomeputative heavy metal regulator HmrR7e-0649.3
NC_009480:739395:751420751420751908489Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein8e-0649.3
NC_011001:2327633:234049923404992340948450Burkholderia cenocepacia J2315 chromosome 2, complete sequenceMerR family regulatory protein8e-0649.3
NC_009720:3210387:322263632226363223058423Xanthobacter autotrophicus Py2, complete genomeMerR family transcriptional regulator9e-0648.9