Pre_GI: BLASTP Hits

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Query: NC_015733:2720183:2739249 Pseudomonas putida S16 chromosome, complete genome

Start: 2739249, End: 2740604, Length: 1356

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:3230939:3258262325826232596591398Pseudomonas fluorescens F113 chromosome, complete genometranscriptional regulator2e-56219
NC_004603:1961432:1980023198002319814141392Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetranscriptional regulator, GntR family3e-20100
NC_008463:3394000:3411438341143834128621425Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative transcriptional regulator, GntR2e-1894.4
NC_011770:3626000:3643062364306236444861425Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator2e-1894.4
NC_010468:4059436:4075244407524440766561413Escherichia coli ATCC 8739, complete genometranscriptional regulator, GntR family with aminotransferase domain4e-1789.7
AC_000091:4569379:4574842457484245762541413Escherichia coli W3110 DNA, complete genomefused predicted DNA-binding transcriptional regulator and predicted aminotransferase1e-1585.1
NC_012759:4501206:4506669450666945080811413Escherichia coli BW2952 chromosome, complete genomefused putative DNA-binding transcriptional regulator/putative aminotransferase1e-1585.1
NC_007404:2048000:2062238206223820636501413Thiobacillus denitrificans ATCC 25259, complete genometranscriptional regulatory protein GntR2e-1377.4
NC_019940:2236630:2247299224729922487261428Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator with HTH domain and aminotransferase domain3e-1377
NC_020829:5382500:5383064538306453845121449Pseudomonas denitrificans ATCC 13867, complete genomeGntR family transcriptional regulator5e-1376.3
NC_014323:1196209:1197605119760511991551551Herbaspirillum seropedicae SmR1 chromosome, complete genomeMocR family transcription regulator protein8e-1375.5
NC_016446:522936:5229365229365243541419Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeGntR family transcriptional regulator1e-1275.1
NC_016945:822229:8222298222298236471419Vibrio cholerae IEC224 chromosome II, complete sequenceGntR family transcriptional regulator1e-1275.1
NC_002506:822401:8224018224018238221422Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completetranscriptional regulator, GntR family1e-1274.7
NC_009456:383819:4012964012964027171422Vibrio cholerae O395 chromosome 1, complete sequenceGntR family transcriptional regulator1e-1274.7
NC_012580:796387:7963877963877978081422Vibrio cholerae M66-2 chromosome II, complete sequenceGntR family transcriptional regulator1e-1274.7
NC_012583:861225:8612258612258626461422Vibrio cholerae O395 chromosome chromosome II, complete sequencetranscriptional regulator, GntR family1e-1274.7
NC_012667:504534:5220105220105234311422Vibrio cholerae MJ-1236 chromosome 2, complete genomeGntR family transcriptional regulator1e-1274.7
NC_013282:551219:5826725826725841591488Cronobacter turicensis, complete genomeUncharacterized HTH-type transcriptional regulator yjiR1e-1274.7
NC_009615:1446132:1452450145245014538711422Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator2e-1274.3
NC_020541:1827689:1844099184409918455081410Rhodanobacter sp. 2APBS1, complete genometranscriptional regulator with HTH domain and aminotransferase domain3e-1170.5
NC_019842:484933:5413965413965427781383Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,GntR family transcriptional regulator8e-1168.9
NC_020410:495184:5368715368715382531383Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (GntR family)9e-1168.6
NC_016625:944925:9569719569719584911521Burkholderia sp. YI23 chromosome 2, complete sequenceGntR family transcriptional regulator2e-1067.4
NC_020126:9795534:9800083980008398015191437Myxococcus stipitatus DSM 14675, complete genomeGntR family transcriptional regulator4e-1066.6
NC_014935:836868:8527328527328541231392Nitratifractor saLSUginis DSM 16511 chromosome, complete genometranscriptional regulator, gntr family with aminotransferase domain protein6e-1065.9
NC_013730:3137391:3153355315335531547941440Spirosoma linguale DSM 74, complete genometranscriptional regulator, GntR family with aminotransferase domain1e-0965.1
NC_008497:2038612:2049190204919020504071218Lactobacillus brevis ATCC 367, complete genomeHTH containing DNA-binding domain and MocR-like aminotransferase2e-0964.3
NC_016835:128757:1459111459111474551545Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,transcriptional regulator with HTH domain and aminotransferase domain3e-0963.5
NC_009832:110239:1221321221321235861455Serratia proteamaculans 568, complete genometranscriptional regulator, GntR family with aminotransferase domain4e-0963.2
NC_020063:2343813:2363727236372723651391413Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator with HTH domain and aminotransferase domain4e-0963.2
NC_007498:1848437:1867467186746718688941428Pelobacter carbinolicus DSM 2380, complete genometranscriptional regulator, GntR family/aminotransferase class-I8e-0962
NC_020063:4127161:4127161412716141285881428Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator with HTH domain and aminotransferase domain1e-0861.6
NC_019771:1356000:1375922137592213774091488Anabaena cylindrica PCC 7122, complete genometranscriptional regulator, GntR family1e-0861.6
NC_008686:1383891:1403811140381114052531443Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative transcriptional regulator, GntR family1e-0861.2
NC_011894:6888562:6924268692426869256981431Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family with aminotransferase domain protein3e-0860.5
NC_014118:1559770:1566130156613015676531524Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, GntR family with aminotransferase domain8e-0858.9
NC_010001:3369500:3372248337224833736391392Clostridium phytofermentans ISDg, complete genometranscriptional regulator, GntR family with aminotransferase domain2e-0757.4
NC_010623:1871492:1919564191956419211351572Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, GntR family with aminotransferase domain3e-0757
NC_015757:2844599:2847618284761828491021485Sulfobacillus acidophilus TPY chromosome, complete genomeGntR family transcriptional regulator3e-0757
NC_016884:813000:8291908291908306471458Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeGntR family transcriptional regulator4e-0756.2
NC_015161:162000:1759481759481773361389Deinococcus proteolyticus MRP chromosome, complete genometranscriptional regulator, GntR family with aminotransferase domain7e-0755.8
NC_004129:2440744:2445027244502724464301404Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, GntR family7e-0755.8
NC_016625:171341:1932201932201946261407Burkholderia sp. YI23 chromosome 2, complete sequencetranscriptional regulator7e-0755.8
NC_014364:894373:8978058978058992231419Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, GntR family with aminotransferase domain7e-0755.5
NC_015556:2265940:2291096229109622925951500Pseudomonas fulva 12-X chromosome, complete genometranscriptional regulator, GntR family with aminotransferase domain1e-0654.7
NC_014500:2688095:2689487268948726909741488Dickeya dadantii 3937 chromosome, complete genomeputative GntR-family regulatory protein and aminotransferase near polyamine transporter2e-0654.7
NC_021184:504728:5106275106275121441518Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator with HTH domain and aminotransferase domain2e-0654.3
NC_015137:1207769:1220812122081212223171506Burkholderia sp. CCGE1001 chromosome 2, complete sequenceGntR family transcriptional regulator with aminotransferase domain2e-0653.9