Pre_GI: BLASTP Hits

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Query: NC_015571:2273503:2285868 Porphyromonas gingivalis TDC60, complete genome

Start: 2285868, End: 2289092, Length: 3225

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015160:797780:7977807977808009443165Odoribacter splanchnicus DSM 20712 chromosome, complete genomeUvrD/REP helicase3e-143509
NC_014933:3015678:3025455302545530287693315Bacteroides helcogenes P 36-108 chromosome, complete genomeUvrD/REP helicase2e-123444
NC_020409:297258:2972582972583004043147Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeUvrD/REP helicase8e-51202
NC_014844:2028666:2049096204909620522633168Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeUvrD/REP helicase2e-45185
NC_002937:2068117:2138236213823621416943459Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeATP-dependent DNA helicase, UvrD/REP family1e-42176
NC_015682:150808:1749901749901773082319Thermodesulfobacterium sp. OPB45 chromosome, complete genomeUvrD/REP helicase1e-24116
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase7e-1790.1
NC_015732:30472:6948969489730223534Spirochaeta caldaria DSM 7334 chromosome, complete genomeUvrD/REP helicase3e-1688.2
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase3e-1688.2
NC_004459:1794540:1790923179092317945433621Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse beta subunit5e-1584
NC_014720:4170:2938329383316532271Caldicellulosiruptor kronotskyensis 2002 chromosome, completeuvrd/rep helicase3e-1481.6
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase4e-1481.3
NC_019940:2546500:2567719256771925713003582Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit beta2e-1379
NC_009053:393700:4160344160344196423609Actinobacillus pleuropneumoniae L20, complete genomeexodeoxyribonuclease V beta chain6e-1273.9
NC_010939:405477:4438164438164474243609Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeexodeoxyribonuclease V beta chain8e-1273.6
NC_014729:1185294:1198980119898012024383459Halogeometricum borinquense DSM 11551 chromosome, complete genomeATP-dependent exonuclase v subunit beta, helicase and exonuclease domain-containing1e-1172.8
NC_015388:269301:2693012693012727143414Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeUvrD/REP helicase2e-1172.4
NC_016627:3972751:3975148397514839789123765Clostridium clariflavum DSM 19732 chromosome, complete genomerecombination helicase AddA2e-1172
NC_010278:398521:4207614207614243693609Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,exodeoxyribonuclease V subunit beta3e-1171.6
NC_013410:2179342:2189179218917921924633285Fibrobacter succinogenes subsp. succinogenes S85 chromosome,UvrD/REP helicase5e-1170.9
NC_011661:1411383:1411383141138314132601878Dictyoglomus turgidum DSM 6724, complete genomeUvrD/REP helicase2e-1068.6
NC_010803:1436397:1454628145462814583083681Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, beta subunit1e-0966.2
NC_010694:3055403:3055403305540330589393537Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V beta chain1e-0966.2
NC_015508:296856:3134503134503166353186Agrobacterium sp. H13-3 chromosome linear, complete sequenceexodeoxyribonuclease V subunit beta2e-0965.9
NC_015978:1266196:1262475126247512662033729Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeATP-dependent helicase/nuclease subunit A2e-0965.9
NC_007651:1620000:1633823163382316365852763Burkholderia thailandensis E264 chromosome I, complete sequenceSuperfamily I DNA and RNA helicases3e-0965.1
NC_007712:3382000:3401801340180134053433543Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V beta subunit3e-0964.7
NC_008639:1573971:1592170159217015958353666Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, beta subunit4e-0964.7
NC_018691:3496420:3492807349280734964303624Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V, beta subunit4e-0964.7
NC_011297:1224749:1231122123112212329991878Dictyoglomus thermophilum H-6-12, complete genomeATP-dependent DNA helicase PcrA8e-0963.5
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase1e-0862.8
NC_019978:1066000:1076331107633110794143084Halobacteroides halobius DSM 5150, complete genomeATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing2e-0862.8
NC_013361:3823347:3840997384099738445393543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit beta2e-0862.4
NC_011745:3197584:3215233321523332187753543Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit beta2e-0862
NC_007946:3125577:3142897314289731464483552Escherichia coli UTI89, complete genomeexodeoxyribonuclease V beta chain2e-0862
NC_011742:3057444:3074776307477630783183543Escherichia coli S88 chromosome, complete genomeexonuclease V subunit beta2e-0862
NC_010498:3023442:3041092304109230446043513Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, beta subunit2e-0862
NC_009465:90000:9221992219953893171Candidatus Vesicomyosocius okutanii HA, complete genomeATP-dependent DNA helicase3e-0861.6
NC_007613:2699500:2715195271519527187373543Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit4e-0861.2
NC_019814:320260:3202603202603236193360Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein4e-0861.2
NC_019815:761480:7794157794157827743360Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiUvrD/Rep helicase family protein 26e-0860.5
NC_015067:1528984:1554473155447315585884116Bifidobacterium longum subsp. longum JCM 1217, complete genomeATP-dependent nuclease subunit A8e-0860.5
NC_017047:2042346:2042926204292620463183393Rahnella aquatilis HX2 chromosome, complete genomeUvrD/REP helicase1e-0759.7
NC_015738:978794:1043373104337310470443672Eggerthella sp. YY7918, complete genomeATP-dependent exoDNAse exonuclease V subunit beta1e-0759.3
NC_014837:1144500:1151150115115011545423393Pantoea sp. At-9b chromosome, complete genomeUvrD/REP helicase2e-0758.9
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase2e-0758.5
NC_003063:304962:3068053068053089252121Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-0758.2
NC_003305:1743939:1765832176583217678982067Agrobacterium tumefaciens str. C58 chromosome linear, completeATP-dependent DNA helicase3e-0758.2
NC_008752:2056547:2074331207433120767872457Acidovorax avenae subsp. citrulli AAC00-1, complete genomeUvrD/REP helicase4e-0757.8
NC_014926:795549:7955497955497984252877Thermovibrio ammonificans HB-1 chromosome, complete genomeUvrD/REP helicase5e-0757.4
NC_020299:149118:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein6e-0757.4
NC_020299:127480:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein6e-0757.4
NC_009785:1443500:1456866145686614605163651Streptococcus gordonii str. Challis substr. CH1, complete genomefirst chain of major exonuclease RexA7e-0757
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II8e-0757
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase8e-0757
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)8e-0757
NC_015977:2807782:2831058283105828339462889Roseburia hominis A2-183 chromosome, complete genomeSuperfamily I helicase domain and RecB family exonuclease domain containing protein1e-0656.6
NC_013731:11605:4345543455463552901Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequenceUvrD/REP helicase1e-0656.2
NC_011206:2512667:2516056251605625196523597Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, beta subunit1e-0656.2
NC_002663:564958:5899775899775936693693Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecB2e-0655.8
NC_007907:1940000:1958144195814419623224179Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0655.8
NC_011830:3025437:3043677304367730478554179Desulfitobacterium hafniense DCB-2, complete genomerecombination helicase AddA2e-0655.8
NC_015428:2291430:2308080230808023118383759Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeATP-dependent helicase/nuclease subunit A2e-0655.8
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA2e-0655.5
NC_008253:2965573:2983115298311529866573543Escherichia coli 536, complete genomeexodeoxyribonuclease V beta chain2e-0655.5
NC_002696:3759551:3785717378571737893283612Caulobacter crescentus CB15, complete genomehelicase, UvrD/Rep family3e-0655.1
NC_014541:4167916:4183237418323741854022166Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent DNA helicase UvrD3e-0655.1
NC_014315:2239725:2236289223628922397323444Nitrosococcus watsoni C-113 chromosome, complete genomeUvrD/REP helicase3e-0655.1
NC_010003:795355:8349168349168370362121Petrotoga mobilis SJ95, complete genomeUvrD/REP helicase3e-0655.1
NC_015574:868000:8875628875628899192358Methanobacterium sp. SWAN-1 chromosome, complete genomeUvrD/REP helicase3e-0654.7
NC_013851:3478153:3489678348967834935323855Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, beta subunit4e-0654.7
NC_014550:615609:6289646289646313422379Arthrobacter arilaitensis Re117, complete genomeATP-dependent DNA helicase PcrA5e-0654.3
NC_006510:1400000:1410700141070014131232424Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-0654.3
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase5e-0654.3
NC_015425:369225:3726203726203763543735Clostridium botulinum BKT015925 chromosome, complete genomeATP-dependent nuclease subunit A6e-0653.9
NC_018868:2867500:2882650288265028846712022Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeATP-dependent DNA helicase Rep9e-0653.5