Pre_GI: BLASTP Hits

Some Help

Query: NC_014328:303063:344934 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 344934, End: 346187, Length: 1254

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017221:535000:5462305462305474921263Bifidobacterium longum subsp. longum KACC 91563 chromosome,restriction endonuclease S subunit7e-86317
NC_008054:899441:9101449101449113791236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit3e-69262
NC_014169:1784435:1795590179559017967861197Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit1e-62240
NC_014169:1784435:1800006180000618010341029Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit2e-53210
NC_007793:459045:4590454590454602561212Staphylococcus aureus subsp. aureus USA300, complete genomeputative restriction/modification system specificity protein2e-52206
NC_010079:458940:4589404589404601511212Staphylococcus aureus subsp. aureus USA300_TCH1516, completetype I site-specific deoxyribonuclease specificity subunit2e-52206
NC_002745:450000:4525494525494537601212Staphylococcus aureus subsp. aureus N315, complete genomeprobable restriction modification system specificity subunit2e-52206
NC_002758:475516:4770654770654782761212Staphylococcus aureus subsp. aureus Mu50, complete genomeprobable restriction modification system specificity subunit2e-52206
NC_009487:486000:4878104878104890211212Staphylococcus aureus subsp. aureus JH9 chromosome, completerestriction modification system DNA specificity subunit2e-52206
NC_009632:486331:4878804878804890911212Staphylococcus aureus subsp. aureus JH1 chromosome, completerestriction modification system DNA specificity subunit2e-52206
NC_009641:448640:4486404486404498511212Staphylococcus aureus subsp. aureus str. Newman chromosome,type I restriction modification system, site specificity determination subunit2e-52206
NC_013450:412122:4136714136714148821212Staphylococcus aureus subsp. aureus ED98, complete genometype I restriction-modification system S subunit2e-52206
NC_017341:472685:4726854726854738961212Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,restriction endonuclease S subunit2e-52206
NC_017343:416834:4168344168344180451212Staphylococcus aureus subsp. aureus ECT-R 2, complete genometype I restriction modification DNA specificity domain protein2e-52206
NC_017347:469024:4690244690244702351212Staphylococcus aureus subsp. aureus T0131 chromosome, completeRestriction modification system DNA specificity domain protein2e-52206
NC_014616:1296287:1306098130609813073361239Bifidobacterium bifidum S17 chromosome, complete genomeHsdS-like protein of Type I restriction-modification system1e-49197
NC_010816:2326453:2338749233874923399901242Bifidobacterium longum DJO10A, complete genomeRestriction endonuclease S subunit9e-49194
NC_011830:4187362:4191475419147541926951221Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein5e-48192
NC_014638:1333976:1345578134557813468191242Bifidobacterium bifidum PRL2010 chromosome, complete genomerestriction endonuclease S subunit2e-45183
NC_004307:2208591:2219603221960322208231221Bifidobacterium longum NCC2705, complete genomeHsdS specificity protein of type I restriction-modification system3e-39163
NC_017068:1143515:1184538118453811857701233Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction enzyme, specificity subunit2e-37157
NC_005139:796546:8174068174068187071302Vibrio vulnificus YJ016 chromosome I, complete sequencerestriction endonuclease S subunit1e-35150
NC_013037:6281164:6322095632209563233631269Dyadobacter fermentans DSM 18053, complete genomerestriction modification system DNA specificity domain5e-33142
NC_015052:1771976:1781878178187817830351158Bifidobacterium longum subsp. infantis 157F, complete genomerestriction-modification system specificity subunit9e-33141
NC_016584:1998000:2044072204407220453071236Desulfosporosinus orientis DSM 765 chromosome, complete genomerestriction endonuclease S subunit3e-31136
NC_014323:5219154:5228943522894352302081266Herbaspirillum seropedicae SmR1 chromosome, complete genomeType I site-specific deoxyribonuclease specificity subunit6e-31135
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein1e-27124
NC_015634:2595500:2612515261251526136931179Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein3e-27122
NC_006270:741731:7518027518027529951194Bacillus licheniformis ATCC 14580, complete genomeHsdIB4e-27122
NC_006322:741516:7515867515867527791194Bacillus licheniformis ATCC 14580, complete genomehypothetical protein4e-27122
NC_009832:4521585:4538281453828145395101230Serratia proteamaculans 568, complete genomerestriction modification system DNA specificity domain1e-26121
NC_014727:995480:1006396100639610075681173Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,type-i specificity determinant subunit8e-27121
NC_017338:436711:4382604382604394951236Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetype I restriction modification system, site specificity determination subunit, HsdS_13e-26119
NC_013199:845000:8452258452258464061182Lactobacillus rhamnosus Lc 705, complete genometype I restriction modification system DNA specificity domain, enzyme S protein (hsdS)1e-25117
NC_015737:831792:8542308542308554021173Clostridium sp. SY8519, complete genomehypothetical protein1e-24114
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit2e-24113
NC_013170:311045:352409352409353035627Cryptobacterium curtum DSM 15641, complete genomehypothetical protein6e-24112
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein8e-24111
NC_014562:3985500:3997879399787939990151137Pantoea vagans C9-1 chromosome, complete genometype I restriction-modification system specificty subunit4e-23109
NC_010581:2999002:3041441304144130426881248Beijerinckia indica subsp. indica ATCC 9039, complete genomerestriction modification system DNA specificity domain6e-23108
NC_014632:1112733:1145320114532011466211302Ilyobacter polytropus DSM 2926 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-23108
NC_011830:4187362:4193726419372641949671242Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein2e-1997.1
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein7e-1995.5
NC_018604:2579000:2603755260375526049511197Brachyspira pilosicoli WesB complete genometype I restriction-modification enzyme S subunit2e-1893.6
NC_015500:484984:5002385002385014611224Treponema brennaborense DSM 12168 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-1892.8
NC_009953:3224412:3233728323372832349661239Salinispora arenicola CNS-205 chromosome, complete genomerestriction endonuclease S subunits-like protein7e-1892
NC_002516:3079850:3094757309475730960521296Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-1791.3
NC_014219:192555:2130542130542142891236Bacillus selenitireducens MLS10 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1790.9
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit3e-1789.7
NC_018528:1932000:196291319629131963773861Lactobacillus helveticus R0052 chromosome, complete genometype I restriction endonuclease S subunit9e-1788.6
NC_010645:369408:3960523960523972901239Bordetella avium 197N, complete genomerestriction modification system, specificity subunit1e-1688.2
NC_015222:3137167:3144490314449031457521263Nitrosomonas sp. AL212 chromosome, complete genomerestriction modification system DNA specificity domain2e-1687.4
NC_008054:899441:9123779123779135401164Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit3e-1686.7
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-1584.7
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit1e-1584.3
NC_016782:1076619:1083560108356010847531194Corynebacterium diphtheriae 241 chromosome, complete genometype I restriction enzyme, S subunit2e-1480.9
NC_016786:1079000:1083532108353210847251194Corynebacterium diphtheriae HC01 chromosome, complete genometype I restriction enzyme, S subunit2e-1480.9
NC_008571:744500:7506847506847519401257Gramella forsetii KT0803, complete genometype I restriction-modification system DNA speci ficity subunit8e-1478.6
NC_014217:2760898:2772811277281127739891179Starkeya novella DSM 506 chromosome, complete genomerestriction modification system DNA specificity domain protein8e-1375.1
NC_013446:1724000:1729654172965417309431290Comamonas testosteroni CNB-2, complete genomehypothetical protein2e-1274.3
NC_009052:4335754:4345846434584643471291284Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain4e-1273.2
NC_015164:493159:5474975474975487861290Bacteroides salanitronis DSM 18170 chromosome, complete genomerestriction modification system DNA specificity domain3e-1273.2
NC_013204:929434:9634259634259658242400Eggerthella lenta DSM 2243, complete genomeN-6 DNA methylase8e-1272
NC_006672:47610:6642766427676351209Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceType I restriction-modification enzyme S subunit1e-1171.6
NC_010545:1475410:1490965149096514922001236Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, specificity subunit2e-1170.5
NC_014216:2334568:2339611233961123409301320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-1169.7
NC_003919:3396136:3402660340266034039401281Xanthomonas axonopodis pv. citri str. 306, complete genometype I restriction-modification system specificity determinant5e-1169.3
NC_007644:1694879:1707326170732617086541329Moorella thermoacetica ATCC 39073, complete genomeRestriction modification system DNA specificity domain5e-1169.3
NC_018720:2138180:2150752215075221521011350Bifidobacterium asteroides PRL2011 chromosome, complete genometype I restriction-modification system9e-1168.6
NC_016944:1937645:1958591195859119599191329Vibrio cholerae IEC224 chromosome I, complete sequencetype I restriction enzyme, S subunit2e-1067.4
NC_002505:1892430:1912283191228319136711389Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1067.4
NC_016445:1363831:1383683138368313850231341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetype I restriction enzyme, S subunit2e-1067.4
NC_009457:1444449:1465386146538614667741389Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-1067.4
NC_012578:1838470:1859416185941618608041389Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-1067.4
NC_012582:1976962:1996805199680519981931389Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein2e-1067.4
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system2e-1067
NC_016589:183432:2040932040932054061314Burkholderia sp. YI23 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein3e-1066.6
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit1e-0964.7
NC_011283:5011497:5019495501949550208621368Klebsiella pneumoniae 342 chromosome, complete genometype I restriction modification DNA specificity domain protein1e-0964.7
NC_003901:3591500:3598245359824535996271383Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit1e-0964.7
NC_011666:1661491:1673298167329816746171320Methylocella silvestris BL2, complete genometype I restriction enzyme2e-0963.9
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-0963.5
NC_003902:555699:5640055640055652971293Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative restriction modification system specificity subunit5e-0962.8
NC_007086:557789:5660955660955673871293Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction modification system specificity subunit5e-0962.8
NC_014366:1435785:1438219143821914393101092Gamma proteobacterium HdN1, complete genome1e-0861.2
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system3e-0860.1
NC_012440:1215838:1228897122889712302431347Persephonella marina EX-H1, complete genometype I restriction-modification system specificty subunit1e-0757.8
NC_008322:2077628:2102612210261221039581347Shewanella sp. MR-7, complete genomerestriction modification system DNA specificity domain2e-0757
NC_020302:744956:759284759284759622339Corynebacterium halotolerans YIM 70093 = DSM 44683, completetype IC specificity subunit2e-0757
NC_005773:106000:1218821218821232281347Pseudomonas syringae pv. phaseolicola 1448A, complete genometype I restriction-modification system specificity subunit5e-0755.8
NC_014618:690056:7105557105557117391185Enterobacter cloacae SCF1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein7e-0755.5
NC_007575:973559:9842349842349854961263Sulfurimonas denitrificans DSM 1251, complete genomerestriction modification system DNA specificity subunit9e-0755.1
NC_014506:157396:1630731630731644011329Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeRestriction endonuclease S subunit2e-0653.9
NC_014973:3452100:3487751348775134891301380Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0653.1
NC_010682:460523:4806054806054819121308Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system DNA specificity domain6e-0652.4
NC_016641:2618587:262293726229372623101165Paenibacillus terrae HPL-003 chromosome, complete genomeSau1hsdS19e-0652