Pre_GI: BLASTP Hits

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Query: NC_014323:3976351:4033689 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4033689, End: 4034684, Length: 996

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4790482:481891148189114819822912Pseudomonas putida ND6 chromosome, complete genomeputative AraC family transcriptional regulator2e-29130
NC_008392:1029134:1032894103289410339191026Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, AraC family7e-28124
NC_008061:2153495:2153495215349521545021008Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-28124
NC_008545:115292:1348071348071358141008Burkholderia cenocepacia HI2424 plasmid 1, complete sequencetranscriptional regulator, AraC family2e-27123
NC_010557:679656:7013457013457023731029Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family7e-26118
NC_010468:1343228:1361194136119413622461053Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family6e-24111
NC_008825:2564965:257942525794252580411987Methylibium petroleiphilum PM1, complete genomeputative AraC-family transcriptional regulator1e-23110
NC_008258:2542863:2543768254376825448201053Shigella flexneri 5 str. 8401, complete genomeputative ARAC-type regulatory protein1e-23110
NC_014814:3364336:337792233779223378278357Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, AraC family6e-1995.1
NC_007511:3103999:3124442312444231254461005Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1790.5
NC_010805:1642978:1668352166835216693561005Burkholderia multivorans ATCC 17616 chromosome 2, completeAraC family transcriptional regulator8e-1581.6
NC_012522:5847699:5855486585548658564901005Rhodococcus opacus B4, complete genomeputative thc operon regulatory protein2e-1480.1
NC_016002:2652500:2664380266438026653991020Pseudogulbenkiania sp. NH8B, complete genomeAraC family transcriptional regulator9e-1477.8
NC_010296:2200054:2218871221887122198751005Microcystis aeruginosa NIES-843, complete genometranscriptional regulator1e-1377.8
NC_015312:6717973:6725802672580267268601059Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeAraC family transcriptional regulator2e-1376.6
NC_015723:2550000:2553741255374125548051065Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator6e-1375.5
NC_009077:2308634:231165523116552312050396Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type8e-1374.7
NC_017328:2586171:258770325877032588329627Shigella flexneri 2002017 chromosome, complete genomeEthanolamine operon regulatory protein3e-1273.2
NC_004741:2526421:252820025282002528760561Shigella flexneri 2a str. 2457T, complete genomeputative ARAC-type regulatory protein3e-1273.2
NC_009511:4582188:459546145954614596450990Sphingomonas wittichii RW1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1170.1
NC_015726:2177783:218982021898202190776957Cupriavidus necator N-1 chromosome 1, complete sequenceAraC family transcriptional regulator7e-1168.2
NC_020302:1241504:124750612475061248498993Corynebacterium halotolerans YIM 70093 = DSM 44683, completeAraC family transcriptional regulator1e-1067.8
NC_009338:555587:5624375624375635461110Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein6e-1065.5
NC_009077:1725683:177062317706231771621999Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type1e-0964.7
NC_008319:262894:273633273633274598966Synechococcus sp. CC9311, complete genomeprobable transcriptional regulator, AraC family, putative8e-1064.7
NC_008705:1839983:1851259185125918523681110Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type8e-1064.7
NC_008705:1790222:1837844183784418389531110Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type8e-1064.7
NC_016147:2964178:297845229784522979423972Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeAraC family regulatory protein3e-0963.2
NC_011666:1572487:159137615913761592359984Methylocella silvestris BL2, complete genometranscriptional regulator, AraC family3e-0962.8
NC_007951:3655088:365508836550883656071984Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, AraC family1e-0860.8
NC_010170:1580832:158669015866901587673984Bordetella petrii, complete genometranscriptional regulator, AraC family1e-0860.8
NC_016830:4639388:464485146448514645618768Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator2e-0860.5
NC_016604:3184855:3214230321423032152311002Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain2e-0860.5
NC_015723:430165:445557445557446420864Cupriavidus necator N-1 chromosome 2, complete sequencetranscriptional regulator2e-0860.1
NC_010170:3944228:3955435395543539564451011Bordetella petrii, complete genomeAraC-type transcriptional regulator1e-0757.8
NC_014479:2505823:251979825197982520709912Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative AraC-like transcriptional regulator1e-0757.4
NC_010676:2975572:298379829837982984772975Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0757
NC_013947:326980:3285913285913296791089Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, AraC family2e-0757
NC_004463:8401060:8411896841189684129091014Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein3e-0756.6
NC_012721:2556160:2556160255616025571941035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein3e-0756.2
NC_014654:1113116:1115573111557311171861614Halanaerobium sp. 'sapolanicus' chromosome, complete genometwo component transcriptional regulator, AraC family3e-0756.2
NC_014834:3472000:348281634828163483802987Rhodopseudomonas palustris DX-1 chromosome, complete genomeAraC family transcriptional regulator4e-0755.8
NC_009654:4624459:463007746300774630919843Marinomonas sp. MWYL1, complete genomeAraC family transcriptional regulator4e-0755.8
NC_015436:202384:203058203058203828771Spirochaeta coccoides DSM 17374 chromosome, complete genometwo component transcriptional regulator, AraC family5e-0755.5
NC_003295:659837:672486672486673451966Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN7e-0755.1
NC_008027:2909000:290913229091322910049918Pseudomonas entomophila L48, complete genometranscriptional regulator, AraC family1e-0654.7
NC_015559:3511231:351357435135743514419846Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeAraC family transcriptional regulator9e-0754.7
NC_014258:355845:375318375318376244927Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional Activator RhaS9e-0754.7
NC_009092:2282437:229102922910292291928900Shewanella loihica PV-4, complete genometranscriptional regulator, AraC family8e-0754.7
NC_011000:1216430:1250917125091712520081092Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein1e-0654.3
NC_004547:667988:688832688832689677846Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeAraC-family transcriptional regulator2e-0653.5
NC_010623:1961685:1973975197397519750391065Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0653.5
NC_002516:2222896:224030222403022241291990Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator3e-0653.1
NC_013892:2108175:214256721425672143490924Xenorhabdus bovienii SS-2004 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_015675:6493444:6508665650866565097441080Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator7e-0652
NC_014923:5940500:5953994595399459550731080Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix- domain containing protein AraC type7e-0652
NC_019973:5869500:5882954588295458840331080Mesorhizobium australicum WSM2073, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain7e-0652
NC_014541:1617678:163751416375141638503990Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, AraC family6e-0652
NC_021150:3505234:352654635265463527520975Azotobacter vinelandii CA6, complete genomeArgR-like transcriptional regulator, AraC family6e-0652
NC_012560:3505235:352654735265473527521975Azotobacter vinelandii DJ, complete genomeArgR-like transcriptional regulator, AraC family6e-0652
NC_014118:987889:101553710155371016523987Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family7e-0651.6
NC_015410:2258800:228399222839922284939948Pseudomonas mendocina NK-01 chromosome, complete genomeAraC family transcriptional regulator8e-0651.6
NC_008027:2909000:291245129124512913365915Pseudomonas entomophila L48, complete genometranscription regulator, AraC family9e-0651.2