Pre_GI Gene

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Host: NC_008545 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008545:115292 Burkholderia cenocepacia HI2424 plasmid 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1152921172321941hypothetical proteinBLASTP
1172681200542787Rhs element Vgr proteinQuickGO ontologyBLASTP
1207261221861461hypothetical protein
1234931247011209aminotransferase class I and IIQuickGO ontologyBLASTP
1250821261911110NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
126344127024681DSBA oxidoreductaseQuickGO ontologyBLASTP
127094127435342alkylhydroperoxidase like protein AhpD familyQuickGO ontologyBLASTP
127562128125564transcriptional regulator TetR familyQuickGO ontologyBLASTP
128484129038555OsmC family proteinQuickGO ontologyBLASTP
129184129954771short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
1300991309718735-carboxymethyl-2-hydroxymuconate delta-isomeraseQuickGO ontologyBLASTP
1310591325011443AmidaseQuickGO ontologyBLASTP
1325381337671230major facilitator superfamily MFS_1QuickGO ontologyBLASTP
133790134728939hypothetical proteinBLASTP
1348071358141008transcriptional regulator AraC familyQuickGO ontologyBLASTP