Pre_GI: BLASTP Hits

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Query: NC_013716:5020204:5020204 Citrobacter rodentium ICC168, complete genome

Start: 5020204, End: 5030295, Length: 10092

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:3327881:33412233341223335129610074Citrobacter rodentium ICC168, complete genomeLifA-like protein06451
NC_013716:2764550:2778996277899627886229627Citrobacter rodentium ICC168, complete genomelymphocyte inhibitory factor A03405
NC_013361:5319497:5365603536560353752749672Escherichia coli O26:H11 str. 11368 chromosome, complete genomeEfa1/LifA02868
AP010958:5090696:5095047509504751047189672Escherichia coli O103:H2 str. 12009 DNA, complete genomeEfa1/LifA-like protein02845
AP010958:3627355:3642322364232236519939672Escherichia coli O103:H2 str. 12009 DNA, complete genomeEfa1/LifA-like protein02845
NC_013353:3627355:3642322364232236519939672Escherichia coli O103:H2 str. 12009, complete genomeEfa1/LifA-like protein02845
NC_013353:5090696:5095047509504751047189672Escherichia coli O103:H2 str. 12009, complete genomeEfa1/LifA-like protein02845
NC_013364:5083949:5087662508766250973339672Escherichia coli O111:H- str. 11128, complete genomeEfa1/LifA-like protein02845
NC_013941:3676146:3691115369111537007869672Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEHEC factor for adherence02845
NC_011601:3338888:3353864335386433635359672Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeEfa1/LifA protein02840
NC_007414:56508:7854278542880519510Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequenceputative cytotoxin6e-153543
NC_002128:35000:5598155981654909510Escherichia coli O157:H7 str. Sakai plasmid pO157, completetoxin B2e-152542
NC_011601:1114104:1129858112985811377327875Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeEfa1/LifA-like protein3e-100369
NC_011353:3956630:3971598397159839728991302Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3e-0760.1
NC_002655:3919545:3934514393451439358151302Escherichia coli O157:H7 EDL933, complete genomeputative cytotoxin3e-0760.1