Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:2898434:2899918 Citrobacter rodentium ICC168, complete genome

Start: 2899918, End: 2900226, Length: 309

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008563:2565876:256587625658762566184309Escherichia coli APEC O1, complete genomehypothetical protein1e-43174
NC_013941:2928000:292813029281302928438309Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-43173
NC_011415:2732000:273577227357722736080309Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-43173
NC_011274:2483038:248667424866742486958285Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-40162
NC_011294:2492168:249580324958032496087285Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-40162
NC_016831:531404:547919547919548203285Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-40162
NC_003198:2453074:245670924567092456993285Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-40162
NC_006511:529424:545890545890546174285Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-40162
NC_011083:2542876:254651025465102546794285Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-40162
NC_004631:531254:547719547719548003285Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-40162
NC_011147:529458:545924545924546208285Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-40162
NC_011205:2621415:262290426229042623188285Salmonella enterica subsp. enterica serovar Dublin str. CT_020218535e-40162
NC_012125:1360593:137819013781901378474285Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-40162
NC_016832:531208:547673547673547957285Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-40162
NC_000913:2455037:245867224586722458956285Escherichia coli K12, complete genomehypothetical protein2e-39160
AC_000091:2462461:246609624660962466380285Escherichia coli W3110 DNA, complete genomehypothetical protein2e-39160
NC_010473:2548946:255043725504372550721285Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-39160
NC_011742:2489000:248900824890082489292285Escherichia coli S88 chromosome, complete genomehypothetical protein2e-39160
NC_012759:2342986:234447723444772344761285Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-39160
CP002185:2608000:261239826123982612682285Escherichia coli W, complete genomeconserved protein6e-39159
CP002516:1475521:149317514931751493459285Escherichia coli KO11, complete genomeConserved hypothetical protein CHP007436e-39159
NC_013361:3254000:325847132584713258755285Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-39159
NC_016902:1475521:149317514931751493459285Escherichia coli KO11FL chromosome, complete genomehypothetical protein6e-39159
NC_011748:2655989:265962326596232659907285Escherichia coli 55989, complete genomehypothetical protein4e-39159
CU928145:2655989:265962326596232659907285Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein4e-39159
NC_014618:1452927:146632014663201466604285Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein4e-36149
NC_015968:3277217:328091332809133281197285Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein6e-35145
NC_015663:5253242:525685652568565257140285Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-34142
NC_009436:3117661:312128231212823121566285Enterobacter sp. 638, complete genomehypothetical protein1e-33141
NC_013421:1545386:156362815636281563924297Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-29126
NC_016513:1720006:173038517303851730675291Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNA mismatch repair protein1e-1685.1