Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:2476334:2476334 Citrobacter rodentium ICC168, complete genome

Start: 2476334, End: 2477062, Length: 729

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2898964:292303529230352923757723Escherichia coli O111:H- str. 11128, complete genomebifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase UbiG4e-131467
NC_009654:3215205:324053332405333241255723Marinomonas sp. MWYL1, complete genomeubiquinone biosynthesis O-methyltransferase2e-85315
NC_009901:2485965:250207425020742502784711Shewanella pealeana ATCC 700345, complete genomeubiquinone biosynthesis O-methyltransferase2e-85315
NC_002927:3716894:372060537206053721378774Bordetella bronchiseptica RB50, complete genome3-demethylubiquinone-9 3-methyltransferase9e-81299
NC_010278:315941:317627317627318364738Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,3-demethylubiquinone-9 3-methyltransferase2e-80298
NC_009053:313779:314720314720315424705Actinobacillus pleuropneumoniae L20, complete genome3-demethylubiquinone-9 3-methyltransferase3e-80298
NC_010939:321492:322552322552323256705Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3-demethylubiquinone-9 3-methyltransferase2e-79295
NC_014315:2327083:233100023310002331731732Nitrosococcus watsoni C-113 chromosome, complete genomeubiquinone biosynthesis O-methyltransferase5e-78290
NC_007404:974461:100643910064391007137699Thiobacillus denitrificans ATCC 25259, complete genome3-demethylubiquinone-9 3-methyltransferase1e-77289
NC_010524:1005355:102122110212211021928708Leptothrix cholodnii SP-6, complete genomeubiquinone biosynthesis O-methyltransferase3e-74278
NC_015731:2811579:281293028129302813637708Nitrosomonas sp. Is79A3 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase6e-74277
NC_008782:2568027:261920526192052619918714Acidovorax sp. JS42, complete genomeubiquinone biosynthesis O-methyltransferase2e-73275
NC_014311:2606434:260572126057212606437717Ralstonia solanacearum PSI07 chromosome, complete genomebifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase5e-73273
NC_008752:3595516:362265936226593623375717Acidovorax avenae subsp. citrulli AAC00-1, complete genomeubiquinone biosynthesis O-methyltransferase6e-73273
NC_005061:524704:527499527499528236738Candidatus Blochmannia floridanus, complete genome3-demethylubiquinone-9 3-methyltransferase9e-72270
NC_014910:1912552:191615819161581916871714Alicycliphilus denitrificans BC chromosome, complete genomeubiquinone biosynthesis o-methyltransferase8e-72270
NC_015422:2078618:208461920846192085332714Alicycliphilus denitrificans K601 chromosome, complete genomeubiquinone biosynthesis O-methyltransferase8e-72270
NC_008781:2925818:293162429316242932340717Polaromonas naphthalenivorans CJ2, complete genomeubiquinone biosynthesis O-methyltransferase3e-70265
NC_010804:996837:104203410420341042732699Burkholderia multivorans ATCC 17616 chromosome 1, complete3-demethylubiquinone-9 3-methyltransferase3e-69261
NC_008390:987052:100458010045801005278699Burkholderia cepacia AMMD chromosome 1, complete sequenceubiquinone biosynthesis O-methyltransferase6e-69260
NC_012108:1664341:166805016680501668748699Desulfobacterium autotrophicum HRM2, complete genomeUbiG6e-57220
NC_015380:99919:117514117514118242729Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase6e-55214
NC_011894:79282:113187113187113936750Methylobacterium nodulans ORS 2060, complete genomeubiquinone biosynthesis O-methyltransferase4e-52204
NC_007205:499808:504209504209504931723Candidatus Pelagibacter ubique HTCC1062, complete genomeprobable 3-demethylubiquinone-9 3-O-methyltransferase2e-47189
NC_018643:1037456:105849210584921059214723Alpha proteobacterium HIMB5 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase2e-47188
NC_011985:3282924:330826633082663309012747Agrobacterium radiobacter K84 chromosome 1, complete genome3-demethylubiquinone-9 3-methyltransferase protein6e-46184
NC_007798:547800:550420550420551112693Neorickettsia sennetsu str. Miyayama, complete genome3-demethylubiquinone-9 3-methyltransferase2e-42172
NC_013009:562470:565089565089565781693Neorickettsia risticii str. Illinois, complete genome3-demethylubiquinone-9 3-methyltransferase3e-41168
NC_009092:4585784:458873645887364589518783Shewanella loihica PV-4, complete genomeubiquinone biosynthesis O-methyltransferase2e-38159
NC_014774:995000:101654810165481017309762Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete3-demethylubiquinone-9 3-methyltransferase6e-37154
NC_020911:4428000:443902044390204439730711Octadecabacter antarcticus 307, complete genome3-demethylubiquinone-9 3-methyltransferase UbiG9e-31133
NC_008209:695269:711927711927712547621Roseobacter denitrificans OCh 114, complete genome3-demethylubiquinone-9 3-methyltransferase1e-27123
NC_020911:3475096:347509634750963475815720Octadecabacter antarcticus 307, complete genome3-demethylubiquinone-9 3-methyltransferase UbiG4e-27121
NC_006513:2526843:253340825334082534244837Azoarcus sp. EbN1, complete genomeprobable methyltransferase3e-1168.9
NC_009921:5202607:523904652390465239843798Frankia sp. EAN1pec, complete genomeMethyltransferase type 119e-1167.4
NC_015416:1542202:155808115580811558869789Methanosaeta concilii GP-6 chromosome, complete genomemethyltransferase2e-1065.9
NC_011283:5011497:5011497501149750131341638Klebsiella pneumoniae 342 chromosome, complete genomemethyltransferase family protein3e-1065.5
NC_003552:4782635:480040848004084801163756Methanosarcina acetivorans C2A, complete genomeubiE/COQ5 methyltransferase1e-0963.2
NC_011294:4560902:4582673458267345843041632Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-0962.8
NC_006905:4638707:4662789466278946644201632Salmonella enterica subsp. enterica serovar Choleraesuis strputative SAM-dependent methyltransferase2e-0962.8
NC_011274:4538722:4560491456049145621221632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-0962.8
NC_011149:4677412:4710823471082347124481626Salmonella enterica subsp. enterica serovar Agona str. SL483,methyltransferase domain family2e-0962.8
NC_004631:4687270:4702025470202547036531629Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0962.8
NC_013730:5989387:600832260083226009320999Spirosoma linguale DSM 74, complete genomeMethyltransferase type 113e-0962.4
NC_008942:1706191:172229617222961723159864Methanocorpusculum labreanum Z, complete genomehypothetical protein4e-0962
NC_011147:4460726:4491596449159644932211626Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-0962
NC_011205:4718239:4739999473999947416241626Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853SAM-dependent methyltransferase4e-0962
NC_010102:4745949:4759504475950447611291626Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0961.6
NC_011080:4703266:4724514472451447261391626Salmonella enterica subsp. enterica serovar Newport str. SL254,putative SAM-dependent methyltransferase4e-0961.6
NC_014507:245344:263605263605264447843Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase4e-0961.6
NC_009637:1421885:142430414243041425161858Methanococcus maripaludis C7 chromosome, complete genometype 11 methyltransferase5e-0961.6
NC_013223:724394:740826740826741758933Desulfohalobium retbaense DSM 5692, complete genomeMethyltransferase type 125e-0961.6
NC_014973:4630132:4662732466273246639071176Geobacter sp. M18 chromosome, complete genomeCyclopropane-fatty-acyl-phospholipid synthase5e-0961.6
NC_015573:2040500:205804620580462058735690Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometype 11 methyltransferase1e-0860.5
NC_007355:544796:558905558905559684780Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceubiquinone/menaquinone biosynthesis methyltransferase1e-0860.5
NC_007614:261588:271673271673272494822Nitrosospira multiformis ATCC 25196 chromosome 1, complete2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like1e-0860.5
NC_013959:2892660:289377728937772894763987Sideroxydans lithotrophicus ES-1 chromosome, complete genomeMethyltransferase type 111e-0860.1
NC_013446:2164974:2168194216819421693871194Comamonas testosteroni CNB-2, complete genomeCyclopropane-fatty-acyl-phospholipid synthase2e-0859.7
NC_005125:4524868:4537024453702445382261203Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0859.7
NC_007908:1328832:133821413382141339203990Rhodoferax ferrireducens T118, complete genome3-demethylubiquinone-9 3-methyltransferase3e-0859.3
NC_010546:981363:9824309824309836351206Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein2e-0859.3
NC_010545:1781393:180109018010901801974885Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-0859.3
NC_011901:2202690:222946722294672230381915Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like protein2e-0859.3
NC_010511:3199643:320943632094363210371936Methylobacterium sp. 4-46 chromosome, complete genometype 12 methyltransferase3e-0858.9
NC_009467:117812:129492129492130319828Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequencemethyltransferase type 113e-0858.9
NC_016641:1530905:154436315443631545133771Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein4e-0858.5
NC_014623:5181000:519824051982405198983744Stigmatella aurantiaca DW4/3-1 chromosome, complete genomemethyltransferase type 11 domain-containing protein4e-0858.5
NC_015675:2697131:2713931271393127150041074Mesorhizobium opportunistum WSM2075 chromosome, complete genometype 12 methyltransferase4e-0858.5
NC_016629:1111619:114113611411361142077942Desulfovibrio africanus str. Walvis Bay chromosome, completetype 12 methyltransferase5e-0858.2
NC_007645:2294553:229903322990332299827795Hahella chejuensis KCTC 2396, complete genomeSAM-dependent methyltransferase4e-0858.2
NC_009052:3467000:3474894347489434760991206Shewanella baltica OS155, complete genomeMethyltransferase type 116e-0857.8
NC_016745:2280375:230171623017162302483768Oceanimonas sp. GK1 chromosome, complete genometype 11 methyltransferase7e-0857.8
NC_008687:133728:158815158815159498684Paracoccus denitrificans PD1222 chromosome 2, complete sequenceMethyltransferase type 117e-0857.8
NC_017030:4146937:415407241540724154809738Corallococcus coralloides DSM 2259 chromosome, complete genomemethyltransferase7e-0857.8
NC_009953:2727669:274997927499792750830852Salinispora arenicola CNS-205 chromosome, complete genometype 11 methyltransferase1e-0757.4
NC_013889:1159343:116259111625911163202612Thioalkalivibrio sp. K90mix chromosome, complete genomeMethyltransferase type 111e-0756.6
NC_016002:2534516:2535256253525625364641209Pseudogulbenkiania sp. NH8B, complete genomecyclopropane-fatty-acyl-phospholipid synthase1e-0756.6
NC_009052:3467000:347612434761243477035912Shewanella baltica OS155, complete genomeMethyltransferase type 122e-0756.2
NC_014006:850763:9083969083969096371242Sphingobium japonicum UT26S chromosome 1, complete genomecyclopropane-fatty-acyl-phospholipid synthase2e-0755.8
NC_010511:3199643:321036832103683211321954Methylobacterium sp. 4-46 chromosome, complete genometype 11 methyltransferase2e-0755.8
NC_014962:826563:8315068315068326121107Isosphaera pallida ATCC 43644 chromosome, complete genometype 11 methyltransferase2e-0755.8
NC_016109:5290000:530951253095125310330819Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0755.8
NC_020541:1014176:1024159102415910252411083Rhodanobacter sp. 2APBS1, complete genomemethyltransferase family protein3e-0755.5
NC_007958:830000:843146843146843790645Rhodopseudomonas palustris BisB5, complete genomeMethyltransferase type 113e-0755.5
NC_013743:1045488:106232510623251063146822Haloterrigena turkmenica DSM 5511, complete genomeMethyltransferase type 113e-0755.5
NC_000911:352263:374646374646375452807Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0755.5
NC_017039:352263:374646374646375452807Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-0755.5
NC_017052:352251:374634374634375440807Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-0755.5
NC_017277:352263:374646374646375452807Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0755.5
NC_014622:5683400:568701356870135687777765Paenibacillus polymyxa SC2 chromosome, complete genomehypothetical protein3e-0755.5
NC_021177:2139838:214090821409082141639732Streptomyces fulvissimus DSM 40593, complete genomeMethyltransferase5e-0755.1
NC_009348:2362163:236430923643092365085777Aeromonas salmonicida subsp. salmonicida A449, complete genomeS-adenosylmethionine-dependentmethyltransferase4e-0755.1
NC_010162:10208521:102190681021906810220063996Sorangium cellulosum 'So ce 56', complete genomeputative methyltransferase5e-0754.7
NC_011060:2637893:265839426583942659092699Pelodictyon phaeoclathratiforme BU-1, complete genomemagnesium protoporphyrin O-methyltransferase6e-0754.7
NC_009925:330470:335770335770336534765Acaryochloris marina MBIC11017, complete genomemethyltransferase8e-0754.3
NC_014507:863210:898390898390899118729Methanoplanus petrolearius DSM 11571 chromosome, complete genometype 11 methyltransferase7e-0754.3
NC_010322:1520973:1555924155592415622626339Pseudomonas putida GB-1 chromosome, complete genometype 12 methyltransferase7e-0754.3
NC_016048:3667890:369657636965763697313738Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein7e-0754.3
NC_012804:1940500:194050519405051941191687Thermococcus gammatolerans EJ3, complete genomeSAM-dependent methyltransferase, ubiE/COQ5 family7e-0754.3
NC_007677:771168:806019806019806651633Salinibacter ruber DSM 13855, complete genomemethyltransferase domain protein7e-0754.3
NC_011186:515214:539333539333540010678Vibrio fischeri MJ11 chromosome II, complete sequenceprotein SmtA8e-0753.9
NC_017277:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.5
NC_017052:352251:363421363421364206786Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-0653.5
NC_017039:352263:363433363433364218786Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-0653.5
NC_000911:352263:363433363433364218786Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.5
NC_007355:544796:558137558137558889753Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceubiquinone/menaquinone biosynthesis methyltransferase1e-0653.5
NC_008340:420126:425209425209425850642Alkalilimnicola ehrlichei MLHE-1, complete genomeMethyltransferase type 112e-0653.1
NC_007761:781210:788108788108788968861Rhizobium etli CFN 42, complete genomeprobable SAM-dependent methyltransferase protein2e-0652.8
NC_007517:2451547:2460081246008124611181038Geobacter metallireducens GS-15, complete genomeMethylase involved in ubiquinone/menaquinone biosynthesis-like3e-0652
NC_009635:518000:530478530478531110633Methanococcus aeolicus Nankai-3 chromosome, complete genomemethyltransferase type 114e-0652
NC_009434:1068281:1089518108951810906001083Pseudomonas stutzeri A1501, complete genomemethyltransferase, putative4e-0652
NC_009663:946285:9534679534679547861320Sulfurovum sp. NBC37-1, complete genomehypothetical protein5e-0651.6
NC_018681:5627940:563830956383095639157849Nocardia brasiliensis ATCC 700358 chromosome, complete genometype 12 methyltransferase5e-0651.6
NC_020304:2677372:270395627039562704822867Desulfocapsa sulfexigens DSM 10523, complete genomemethyltransferase family protein5e-0651.6
NC_008390:818571:8384568384568397841329Burkholderia cepacia AMMD chromosome 1, complete sequenceMethyltransferase type 114e-0651.6
NC_018750:3141196:3151229315122931525301302Streptomyces venezuelae ATCC 10712, complete genomeCyclopropane-fatty-acyl-phospholipid synthase6e-0651.2
NC_014623:4683671:469287646928764693697822Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-0651.2
NC_010571:4483500:449236444923644493059696Opitutus terrae PB90-1, complete genomeMethyltransferase type 117e-0650.8
NC_021182:4088000:409260340926034093229627Clostridium pasteurianum BC1, complete genomemethylase involved in ubiquinone/menaquinone biosynthesis8e-0650.8
NC_015673:1794590:181610218161021816701600Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein8e-0650.8
NC_013440:3977097:4018547401854740245856039Haliangium ochraceum DSM 14365, complete genomeamino acid adenylation domain protein8e-0650.8
NC_015138:4584846:4584846458484645887093864Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefamily 2 glycosyl transferase1e-0550.4