Pre_GI: BLASTP Hits

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Query: NC_013665:1766158:1766158 Methanocella paludicola SANAE, complete genome

Start: 1766158, End: 1767072, Length: 915

Host Lineage: Methanocella paludicola; Methanocella; Methanocellaceae; Methanocellales; Euryarchaeota; Archaea

General Information: This strain was isolated in Japan from rice paddy samples. Strain SANAE belongs to the Rice Cluster I (RC-I), a 16S rRNA and mcrA gene sequences-defined euryarchaeal lineage within Methanosarcinales and Methanomicrobiales. The RC-I group plays a key role in releasing methane from rice fields, which accounts for 10 to 25% of the global methane emissions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007484:3358000:3369303336930333715672265Nitrosococcus oceani ATCC 19707, complete genomePAS sensor, serine phosphatase RsbU regulator of sigma subunit2e-33142
NC_007760:4055860:4055860405586040591263267Anaeromyxobacter dehalogenans 2CP-C, complete genomePAS/PAC sensor hybrid histidine kinase3e-33142
NC_007355:2426000:2426018242601824297643747Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesignal-transducing histidine kinase3e-31135
NC_009483:1779601:1802418180241818049162499Geobacter uraniireducens Rf4 chromosome, complete genomemulti-sensor signal transduction histidine kinase2e-30133
NC_003901:2906493:2906493290649329091502658Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase4e-30132
NC_007796:2286713:2300593230059323021671575Methanospirillum hungatei JF-1, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism7e-30131
NC_014315:3207684:3219592321959232218682277Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein3e-29129
NC_013037:6209424:6240723624072362449374215Dyadobacter fermentans DSM 18053, complete genomeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor2e-29129
NC_003552:1492500:1513317151331715176874371Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase5e-29128
NC_003552:1492500:1510392151039215122421851Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase4e-28125
NC_015675:4493758:4506118450611845079111794Mesorhizobium opportunistum WSM2075 chromosome, complete genomesignal transduction histidine kinase1e-26120
NC_007355:2039435:2054203205420320570402838Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesensory transduction histidine kinase1e-25117
NC_011146:2485625:2505098250509825070351938Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor signal transduction histidine kinase1e-23110
NC_011832:2668337:2683714268371426862482535Candidatus Methanosphaerula palustris E1-9c, complete genomePAS/PAC sensor signal transduction histidine kinase1e-22107
NC_015574:1474967:1492207149220714946212415Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase4e-22105
NC_012880:3645304:3661255366125536653794125Dickeya dadantii Ech703, complete genomemulti-sensor hybrid histidine kinase3e-21102
NC_007643:2722265:2748141274814127528234683Rhodospirillum rubrum ATCC 11170, complete genomeMulti-sensor Hybrid Histidine Kinase1e-1894
NC_014972:1923035:1941238194123819435022265Desulfobulbus propionicus DSM 2032 chromosome, complete genomeputative PAS/PAC sensor protein3e-1582.8
NC_009633:2137999:2153158215315821554792322Alkaliphilus metalliredigens QYMF chromosome, complete genomePAS/PAC sensor hybrid histidine kinase7e-1581.3
NC_017249:4365935:4380207438020743825702364Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-1374.3
NC_013960:452493:4651284651284671822055Nitrosococcus halophilus Nc4 chromosome, complete genomePAS sensor protein2e-1273.6
NC_013964:161105:1753431753431792483906Haloferax volcanii DS2 plasmid pHV3, complete sequence11-domain light and oxygen sensing his kinase4e-1272.4
NC_014221:3137952:3154798315479831578993102Truepera radiovictrix DSM 17093 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-1170.5
NC_014973:3414459:3414954341495434177972844Geobacter sp. M18 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase4e-1168.9
NC_014165:27246:4602646026479421917Thermobispora bispora DSM 43833 chromosome, complete genomemulti-sensor signal transduction histidine kinase4e-1168.9
NC_009092:1127000:1127012112701211305273516Shewanella loihica PV-4, complete genomemulti-sensor hybrid histidine kinase2e-1066.2
NC_012796:2041579:2056610205661020598373228Desulfovibrio magneticus RS-1, complete genomeputative chemotaxis CheB/CheR fusion protein3e-1066.2
NC_012796:4693500:4701130470113047029471818Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-1066.2
NC_017249:7917586:7930165793016579321591995Bradyrhizobium japonicum USDA 6, complete genometwo-component hybrid sensor and regulator3e-1065.9
NC_004463:2344128:2350024235002423519281905Bradyrhizobium japonicum USDA 110, complete genometwo-component hybrid sensor and regulator4e-1065.9
NC_012483:483425:5242655242655266102346Acidobacterium capsulatum ATCC 51196, complete genomesigma-54 dependent transcriptional regulator, Fis family5e-1065.5
NC_009484:1434000:1437294143729414390691776Acidiphilium cryptum JF-5 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer5e-1065.1
NC_015138:3160764:3160764316076431653684605Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completesignal transduction histidine kinase with CheB and CheR activity6e-1065.1
NC_009617:3926843:3926843392684339299533111Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase7e-1064.7
NC_008752:2615360:2636818263681826414254608Acidovorax avenae subsp. citrulli AAC00-1, complete genomesignal transduction histidine kinase with CheB and CheR activity1e-0964.3
NC_011757:39881:4793747937503692433Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase1e-0964.3
NC_012030:345837:3493413493413511041764Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase1e-0964.3
NC_008800:1942000:1961046196104619631212076Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-0964.3
NC_007348:752692:7526927526927546111920Ralstonia eutropha JMP134 chromosome 2, complete sequencePAS2e-0963.5
NC_017186:361444:3928973928973952182322Amycolatopsis mediterranei S699 chromosome, complete genomesignal transduction protein containing EAL, PAS and GGDEF domain4e-0962.4
NC_014318:381384:3928843928843952052322Amycolatopsis mediterranei U32 chromosome, complete genomesignal transduction protein containing EAL, PAS and GGDEF domain4e-0962.4
NC_007951:2045830:2054351205435120567202370Burkholderia xenovorans LB400 chromosome 1, complete sequencePAS/PAC Sensor Hybrid Histidine Kinase4e-0962.4
NC_011894:6708970:6710443671044367124251983Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase4e-0962
NC_012918:2758775:2758775275877527622153441Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase5e-0962
NC_011979:3880488:3895400389540038988523453Geobacter sp. FRC-32, complete genomemulti-sensor signal transduction histidine kinase6e-0962
NC_012988:4075429:4091338409133840933351998Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS and response regulator receiver domains9e-0961.2
NC_010172:3712000:3725376372537637274122037Methylobacterium extorquens PA1, complete genomePAS sensor protein9e-0961.2
NC_012108:1973861:1982537198253719841711635Desulfobacterium autotrophicum HRM2, complete genomesensory box histidine kinase8e-0961.2
NC_010159:1710268:1712903171290317149842082Yersinia pestis Angola, complete genomeputative sensory box-containing diguanylate cyclase1e-0860.8
NC_011832:913994:9354309354309392333804Candidatus Methanosphaerula palustris E1-9c, complete genomemulti-sensor signal transduction histidine kinase1e-0860.8
NC_008726:3858209:3862007386200738645592553Mycobacterium vanbaalenii PYR-1, complete genomediguanylate cyclase with PAS/PAC sensor2e-0860.5
NC_016629:3629848:3636242363624236398503609Desulfovibrio africanus str. Walvis Bay chromosome, completemulti-sensor hybrid histidine kinase2e-0860.5
NC_017059:2922000:2933360293336029347001341Rhodospirillum photometricum DSM 122, complete genomeFOG: PAS/PAC domain1e-0860.5
NC_011894:3623500:3624775362477536267631989Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase1e-0860.5
NC_010682:288415:2998662998663035313666Ralstonia pickettii 12J chromosome 1, complete sequencediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)3e-0859.7
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase3e-0859.7
NC_010511:6067000:609034760903476090772426Methylobacterium sp. 4-46 chromosome, complete genomeputative PAS/PAC sensor protein4e-0859.3
NC_011146:2485625:2485625248562524894073783Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase5e-0858.9
NC_010814:3673983:3679023367902336800481026Geobacter lovleyi SZ, complete genomeputative PAS/PAC sensor protein6e-0858.5
NC_016599:513357:5346775346775370072331Owenweeksia hongkongensis DSM 17368 chromosome, complete genomePAS domain-containing protein7e-0858.2
NC_004578:2671508:2695933269593326980652133Pseudomonas syringae pv. tomato str. DC3000, complete genomemethyl-accepting chemotaxis protein7e-0858.2
NC_015672:699904:6999046999047023272424Flexistipes sinusarabici DSM 4947 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase1e-0757.8
NC_015136:1101725:1101725110172511059364212Burkholderia sp. CCGE1001 chromosome 1, complete sequencesignal transduction histidine kinase with CheB and CheR activity1e-0757.8
NC_014733:1223359:1248682124868212509282247Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)1e-0757.4
NC_010814:190673:200246200246200680435Geobacter lovleyi SZ, complete genomeputative PAS/PAC sensor protein1e-0757.4
NC_012660:3179980:3203836320383632061512316Pseudomonas fluorescens SBW25 chromosome, complete genomeputative aerobic respiration sensor-response protein; histidine protein kinase/phosphatase, sensor for arcA1e-0757.4
NC_007426:930357:9303579303579334193063Natronomonas pharaonis DSM 2160, complete genomesignal-transducing histidine kinase; probable GAF, PAS/PAC domain protein2e-0757
NC_008149:2652825:265546026554602655978519Yersinia pestis Nepal516, complete genomePAS2e-0756.6
NC_019745:2346970:2351713235171323570075295Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase2e-0756.2
NC_009464:2288500:2304043230404323058931851Uncultured methanogenic archaeon RC-I, complete genomeputative signal transduction histidine kinase3e-0756.2
NC_016626:1699500:1709507170950717110331527Burkholderia sp. YI23 plasmid byi_1p, complete sequencePAS/PAC sensor hybrid histidine kinase4e-0755.8
NC_009675:3067567:3087792308779230907312940Anaeromyxobacter sp. Fw109-5 chromosome, complete genomemulti-sensor signal transduction histidine kinase4e-0755.8
NC_015638:3113253:3126386312638631309304545Lacinutrix sp. 5H-3-7-4 chromosome, complete genomemulti-sensor signal transduction histidine kinase4e-0755.8
NC_017955:3731480:3806707380670738095082802Modestobacter marinus, complete genomemethyl-accepting chemotaxis transducer/sensory box protein4e-0755.8
NC_008609:3921113:3948385394838539524104026Pelobacter propionicus DSM 2379, complete genomemulti-sensor signal transduction histidine kinase3e-0755.8
NC_008312:3728329:3728329372832937319523624Trichodesmium erythraeum IMS101, complete genomeadenylate/guanylate cyclase4e-0755.5
NC_017277:1283477:1305253130525313081652913Synechocystis sp. PCC 6803, complete genomesensory histidine kinase Hik174e-0755.5
NC_017052:1283720:1305451130545113083632913Synechocystis sp. PCC 6803 substr. PCC-N, complete genomesensory histidine kinase Hik174e-0755.5
NC_017039:1283732:1305463130546313083752913Synechocystis sp. PCC 6803 substr. PCC-P, complete genomesensory histidine kinase Hik174e-0755.5
NC_000911:1284552:1306436130643613093482913Synechocystis sp. PCC 6803, complete genomehypothetical protein4e-0755.5
NC_013959:826868:8672508672508700332784Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)5e-0755.5
NC_010172:480000:4827384827384864153678Methylobacterium extorquens PA1, complete genomePAS sensor protein8e-0754.7
NC_007796:1376910:1378948137894813805701623Methanospirillum hungatei JF-1, complete genomeputative PAS/PAC sensor protein1e-0654.3
NC_017192:714346:7328057328057343521548Arcobacter sp. L, complete genomemethyl-accepting chemotaxis protein1e-0654.3
NC_012796:4693500:4712070471207047136081539Desulfovibrio magneticus RS-1, complete genomeputative sensor histidine kinase1e-0654.3
NC_007298:1759881:1802412180241218054022991Dechloromonas aromatica RCB, complete genomePAS:GGDEF1e-0654.3
NC_012969:142000:1446581446581460101353Methylovorus glucosetrophus SIP3-4 chromosome, complete genomePAS/PAC/GAF sensor-containing diguanylate cyclase1e-0654.3
NC_017192:497950:5007825007825039193138Arcobacter sp. L, complete genomehypothetical protein1e-0654.3
NC_007498:1848437:1848437184843718498311395Pelobacter carbinolicus DSM 2380, complete genometranscriptional regulator1e-0653.9
NC_013173:1712138:1712138171213817153653228Desulfomicrobium baculatum DSM 4028, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)1e-0653.9
NC_009464:1804791:1820589182058918227092121Uncultured methanogenic archaeon RC-I, complete genomeputative signal transduction histidine kinase1e-0653.9
NC_007645:3712272:3726842372684237291782337Hahella chejuensis KCTC 2396, complete genomeSignal transduction histidine kinase2e-0653.5
NC_015376:3249773:3264864326486432672962433Burkholderia gladioli BSR3 chromosome chromosome 2, completesensory box sensor histidine kinase/response regulator2e-0653.5
NC_009381:2138625:2177100217710021783921293Yersinia pestis Pestoides F chromosome, complete genomechemotactic transducer2e-0653.5
NC_009454:1462930:1480137148013714825272391Pelotomaculum thermopropionicum SI, complete genomehypothetical protein3e-0653.1
NC_008149:2652825:2656187265618726575421356Yersinia pestis Nepal516, complete genomehypothetical protein3e-0653.1
NC_003450:179689:194601194601195038438Corynebacterium glutamicum ATCC 13032, complete genomePAS/PAC domain-containing protein2e-0653.1
NC_006958:179690:194602194602195039438Corynebacterium glutamicum ATCC 13032, complete genomeSENSOR HISTIDINE KINASE OF TWO-COMPONENT SYSTEM, FRAGMENT2e-0653.1
NC_014972:2503107:2515974251597425183792406Desulfobulbus propionicus DSM 2032 chromosome, complete genomePAS modulated Fis family sigma-54 specific transcriptional regulator2e-0653.1
NC_013943:2431643:244766324476632447986324Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeputative PAS/PAC sensor protein3e-0652.8
NC_019897:3810000:3830137383013738319901854Thermobacillus composti KWC4 chromosome, complete genomePAS domain-containing protein3e-0652.8
NC_010506:5155951:5177746517774651792451500Shewanella woodyi ATCC 51908, complete genomemethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor5e-0652.4
NC_014910:4207227:4224497422449742272622766Alicycliphilus denitrificans BC chromosome, complete genomediguanylate cyclase4e-0652.4
NC_013943:124500:1383321383321409742643Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase4e-0652.4
NC_014972:1982315:1987023198702319892452223Desulfobulbus propionicus DSM 2032 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase4e-0652.4
NC_014640:4532095:4532095453209545332881194Achromobacter xylosoxidans A8 chromosome, complete genomesensory box protein 84e-0652.4
NC_017187:422698:4309904309904328161827Arcobacter butzleri ED-1, complete genometwo-component response regulator5e-0652
NC_012988:4387735:439788543978854398328444Methylobacterium extorquens DM4, complete genomePAS/PAC sensor protein5e-0652
NC_012808:3897751:390841939084193908862444Methylobacterium extorquens AM1, complete genomeputative PAS/PAC sensor protein5e-0652
NC_012968:1191037:1199115119911512005601446Methylotenera mobilis JLW8, complete genomediguanylate cyclase with PAS/PAC and GAF sensors5e-0652
NC_007005:2191500:2211083221108322134222340Pseudomonas syringae pv. syringae B728a, complete genomePAS6e-0652
NC_015666:1849618:1849618184961818519842367Halopiger xanaduensis SH-6 chromosome, complete genomeputative PAS/PAC sensor protein8e-0651.6
NC_016010:1822212:1896930189693018997852856Xanthomonas axonopodis pv. citrumelo F1 chromosome, completesensory box histidine kinase/response regulator hybrid7e-0651.6
NC_011894:6259649:6272210627221062742312022Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase7e-0651.6
NC_013791:1507943:1520725152072515222571533Bacillus pseudofirmus OF4 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase7e-0651.6
NC_014657:473479:4836754836754856812007Caldicellulosiruptor owensensis OL chromosome, complete genome8e-0651.2
NC_012796:985000:9923319923319961283798Desulfovibrio magneticus RS-1, complete genometwo-component hybrid sensor and regulator8e-0651.2
NC_007952:3037590:3047313304731330486111299Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative diguanylate cyclase (GGDEF domain)8e-0651.2
NC_009850:445000:4533724533724551981827Arcobacter butzleri RM4018, complete genometwo-component response regulator9e-0651.2