Pre_GI: BLASTP Hits

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Query: NC_013410:3105121:3117826 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3117826, End: 3120111, Length: 2286

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:2586500:2598432259843226007562325Fibrobacter succinogenes subsp. succinogenes S85 chromosome,ATPase AAA7e-127455
NC_013410:1285857:1313239131323913155422304Fibrobacter succinogenes subsp. succinogenes S85 chromosome,ATPase AAA9e-104378
NC_011768:5900500:5930704593070459329322229Desulfatibacillum alkenivorans AK-01, complete genomeAAA ATPase central domain protein5e-58226
NC_013173:1437464:1438417143841714406122196Desulfomicrobium baculatum DSM 4028, complete genomeAAA ATPase central domain protein2e-55217
NC_013173:1356526:1391874139187413935951722Desulfomicrobium baculatum DSM 4028, complete genomeAAA ATPase central domain protein5e-52206
NC_014762:1715190:1731851173185117339562106Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeAAA ATPase central domain protein3e-50200
NC_015581:680460:6922596922596944722214Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeAAA ATPase central domain-containing protein9e-47189
NC_015740:3631326:3658123365812336602282106Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeATPase1e-41172
NC_009434:3611738:3740101374010137422812181Pseudomonas stutzeri A1501, complete genomeATPase of the AAA+ class2e-41171
NC_010334:4925936:4944828494482849468822055Shewanella halifaxensis HAW-EB4, complete genomeAAA ATPase central domain protein9e-41169
NC_011901:1860887:1872027187202718739941968Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATPase central domain-containing protein3e-39164
NC_015554:3808529:3808529380852938105562028Alteromonas sp. SN2 chromosome, complete genomeATPase7e-37156
NC_008228:816000:8266688266688286742007Pseudoalteromonas atlantica T6c, complete genomeAAA ATPase, central region1e-35152
NC_015732:3145634:3150574315057431525772004Spirochaeta caldaria DSM 7334 chromosome, complete genomeAAA ATPase central domain-containing protein1e-35152
NC_013889:1159343:1187661118766111897962136Thioalkalivibrio sp. K90mix chromosome, complete genomeAAA ATPase central domain protein9e-35149
NC_011138:318168:3181683181683201982031Alteromonas macleodii 'Deep ecotype', complete genomeATPase, AAA family protein5e-30133
NC_004347:4007847:4031563403156340336052043Shewanella oneidensis MR-1, complete genomeATPase, AAA family7e-27122
NC_008321:3815940:3846555384655538485972043Shewanella sp. MR-4, complete genomeAAA ATPase, central domain protein4e-26120
NC_009052:4168776:4183517418351741855502034Shewanella baltica OS155, complete genomeAAA ATPase, central domain protein1e-20102
NC_015577:383071:3961323961323978471716Treponema azotonutricium ZAS-9 chromosome, complete genomeATPase, AAA family2e-1895.1
NC_002689:979191:9965219965219987582238Thermoplasma volcanium GSS1, complete genomeATPase of the AAA+ class involved in cell division2e-1584.7
NC_014736:97751:9775197751999312181Halogeometricum borinquense DSM 11551 plasmid pHBOR03, completeAAA+ family ATPase8e-1582.8
NC_009515:616432:6213526213526235442193Methanobrevibacter smithii ATCC 35061, complete genomecell division protein CDC482e-1481.6
NC_019974:1689486:1704997170499717071952199Natronococcus occultus SP4, complete genomeAAA family ATPase, CDC48 subfamily4e-1480.5
NC_015416:223968:2252392252392274102172Methanosaeta concilii GP-6 chromosome, complete genomeAAA family ATPase2e-1378.2
NC_010337:2793667:281393928139392814934996Heliobacterium modesticaldum Ice1, complete genomeATPase, aaa family4e-1377.4
NC_011898:1802971:1821417182141718236512235Clostridium cellulolyticum H10, complete genomeAAA ATPase central domain protein5e-1377
NC_016791:1454483:1470191147019114724252235Clostridium sp. BNL1100 chromosome, complete genomeAAA ATPase9e-1376.3
NC_015578:2341026:2374859237485923765351677Treponema primitia ZAS-2 chromosome, complete genomeATPase, AAA family1e-1276.3
NC_014166:2983564:3004085300408530058181734Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeAAA ATPase central domain-containing protein3e-1274.3
NC_013926:1009718:1031529103152910337452217Aciduliprofundum boonei T469 chromosome, complete genomeAAA family ATPase, CDC48 subfamily8e-1273.2
NC_019942:1078837:1078837107883710810532217Aciduliprofundum sp. MAR08-339, complete genomeAAA family ATPase, CDC48 subfamily7e-1273.2
NC_009662:276287:2776042776042793341731Nitratiruptor sp. SB155-2, complete genomeAAA family ATPase2e-1171.6
NC_015593:2103815:2144742214474221470332292Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeAAA family ATPase CDC48 subfamily8e-1169.7
NC_016885:2181355:2186839218683921890342196Pyrobaculum oguniense TE7 chromosome, complete genomeAAA ATPase9e-1169.3
NC_014323:3976351:3988594398859439897631170Herbaspirillum seropedicae SmR1 chromosome, complete genomeAAA+ class ATPase1e-1069.3
NC_013204:929434:9403129403129413191008Eggerthella lenta DSM 2243, complete genomeAAA ATPase central domain protein1e-1069.3
NC_015064:2871152:2871152287115228730291878Acidobacterium sp. MP5ACTX9 chromosome, complete genomeAAA ATPase central domain protein2e-1068.9
NC_007950:206474:2118312118312135641734Polaromonas sp. JS666 plasmid 2, complete sequenceAAA ATPase, central region1e-1068.9
NC_013512:126915:1269151269151286481734Sulfurospirillum deleyianum DSM 6946, complete genomeAAA ATPase central domain protein4e-1067.4
NC_014541:475350:513389513389514363975Ferrimonas balearica DSM 9799 chromosome, complete genomeAAA ATPase central domain protein4e-1067
NC_007644:280000:2970092970092981211113Moorella thermoacetica ATCC 39073, complete genomeAAA ATPase5e-1067
NC_016599:1412000:1415618141561814169581341Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeAAA ATPase1e-0965.9
NC_012918:1921891:1939883193988319412351353Geobacter sp. M21 chromosome, complete genomeATPase AAA2e-0964.7
NC_015388:2011280:2017867201786720199932127Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeAAA ATPase central domain protein2e-0964.7
NC_012470:1946968:1955852195585219569761125Streptococcus equi subsp. zooepidemicus, complete genomeDNA-binding protein4e-0964.3
NC_011729:4591500:4593597459359745955941998Cyanothece sp. PCC 7424 chromosome, complete genomeATPase AAA4e-0963.9
NC_013730:4955659:4965862496586249672621401Spirosoma linguale DSM 74, complete genomeAAA ATPase central domain protein5e-0963.5
NC_018876:2628966:2682562268256226836891128Methanolobus psychrophilus R15 chromosome, complete genomeAAA ATPase5e-0963.5
NC_008609:1976403:2032385203238520342381854Pelobacter propionicus DSM 2379, complete genomeAAA ATPase, central domain protein7e-0963.2
NC_010296:1271393:1280752128075212826471896Microcystis aeruginosa NIES-843, complete genomecell division protein7e-0963.2
NC_020388:1479568:1487939148793914890901152Natronomonas moolapensis 8.8.11 complete genomeAAA-type ATPase core domain protein1e-0862.8
NC_015259:673662:7082337082337094321200Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAAA ATPase, central region1e-0862.8
NC_013235:2902617:291267429126742913642969Nakamurella multipartita DSM 44233, complete genomeAAA ATPase central domain protein9e-0962.8
NC_010544:227296:2371652371652393062142Candidatus Phytoplasma australiense, complete genomePutative IMP dehydrogenase/GMP reductase1e-0862.4
NC_019757:2243796:2247237224723722492341998Cylindrospermum stagnale PCC 7417, complete genomeAAA+ family ATPase1e-0862.4
NC_011662:386162:3861623861623885072346Thauera sp. MZ1T, complete genomeAAA ATPase central domain protein1e-0862.4
NC_019757:743305:7572447572447592081965Cylindrospermum stagnale PCC 7417, complete genomeAAA+ family ATPase1e-0862.4
NC_010544:262000:2714422714422735832142Candidatus Phytoplasma australiense, complete genomePutative IMP dehydrogenase/GMP reductase2e-0862
NC_014722:1:84188418106672250Burkholderia rhizoxinica HKI 454, complete genomeATP-dependent Zn proteases2e-0862
NC_010544:816672:8227218227218248382118Candidatus Phytoplasma australiense, complete genomePutative IMP dehydrogenase/GMP reductase2e-0862
NC_008593:1362218:1364588136458813656761089Clostridium novyi NT, complete genomeATPase AAA-like protein2e-0862
NC_010544:743892:7536207536207552361617Candidatus Phytoplasma australiense, complete genome1e-0862
NC_008095:5312926:5330754533075453327782025Myxococcus xanthus DK 1622, complete genomeATP-dependent metalloprotease FtsH2e-0861.6
NC_015711:7265439:7283113728311372850681956Myxococcus fulvus HW-1 chromosome, complete genomeATP-dependent metalloprotease FtsH2e-0861.6
NC_014722:2392781:2393740239374023959292190Burkholderia rhizoxinica HKI 454, complete genomeATP-dependent Zn proteases3e-0861.2
NC_015574:228948:2304682304682315891122Methanobacterium sp. SWAN-1 chromosome, complete genomeAAA ATPase central domain-containing protein3e-0860.8
NC_015731:1106870:1118000111800011200542055Nitrosomonas sp. Is79A3 chromosome, complete genomeAAA ATPase central domain-containing protein4e-0860.8
NC_015666:252740:2979822979822991991218Halopiger xanaduensis SH-6 chromosome, complete genomeadenosinetriphosphatase5e-0860.5
NC_016943:3037382:3040990304099030428821893Blastococcus saxobsidens DD2, complete genomeAAA ATPase5e-0860.5
NC_010544:227296:2288112288112300521242Candidatus Phytoplasma australiense, complete genome4e-0860.5
NC_014722:1682000:1684699168469916871972499Burkholderia rhizoxinica HKI 454, complete genomeATP-dependent Zn proteases4e-0860.5
NC_014151:657382:6733276733276753752049Cellulomonas flavigena DSM 20109 chromosome, complete genomeATP-dependent metalloprotease FtsH5e-0860.1
NC_015518:585816:5971105971105994132304Acidianus hospitalis W1 chromosome, complete genomeAAA ATPase6e-0860.1
NC_007716:266500:2893082893082914552148Aster yellows witches'-broom phytoplasma AYWB, complete genomeATP-dependent Zn protease8e-0859.7
NC_020126:6190662:6208633620863362106752043Myxococcus stipitatus DSM 14675, complete genomeATP-dependent metalloprotease FtsH8e-0859.7
NC_013851:3142182:315145331514533152439987Allochromatium vinosum DSM 180 chromosome, complete genomeAAA ATPase central domain protein1e-0759.3
NC_005303:780557:7950167950167965241509Onion yellows phytoplasma OY-M, complete genomeATP-dependent Zn protease1e-0759.3
NC_014507:245344:2536732536732547161044Methanoplanus petrolearius DSM 11571 chromosome, complete genomeAAA ATPase central domain-containing protein1e-0759.3
NC_007512:771975:8124768124768146322157Pelodictyon luteolum DSM 273, complete genomeAAA ATPase, CDC489e-0859.3
NC_016582:10638524:1065529410655294106574802187Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAAA ATPase1e-0758.9
NC_009441:3597020:3625745362574536268361092Flavobacterium johnsoniae UW101 chromosome, complete genomeATPase central domain-containing protein1e-0758.9
NC_013132:6612520:6620986662098666223651380Chitinophaga pinensis DSM 2588, complete genomeAAA ATPase central domain protein1e-0758.9
NC_000961:597385:6101116101116126332523Pyrococcus horikoshii OT3, complete genomecell division control protein (transitional endoplasmic reticulum ATPase)2e-0758.9
NC_015422:1876102:189155518915551892541987Alicycliphilus denitrificans K601 chromosome, complete genomeAAA ATPase central domain-containing protein2e-0758.5
NC_009659:1923925:1969840196984019709971158Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein2e-0758.2
NC_014666:8459724:847044484704448471412969Frankia sp. EuI1c chromosome, complete genomeAAA ATPase central domain protein2e-0758.2
NC_008261:676000:6930136930136951662154Clostridium perfringens ATCC 13124, complete genomeATP-dependent metalloprotease FtsH3e-0757.8
NC_013407:1177731:1190419119041911931302712Methanocaldococcus vulcanius M7, complete genomeAAA family ATPase, CDC48 subfamily3e-0757.8
NC_008262:654000:6712126712126733532142Clostridium perfringens SM101, complete genomeATP-dependent metalloprotease FtsH4e-0757.8
NC_009659:892272:9135759135759146931119Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein5e-0757.4
NC_013159:3858425:3882047388204738844432397Saccharomonospora viridis DSM 43017, complete genomemembrane protease FtsH catalytic subunit4e-0757.4
NC_007716:196000:2092632092632113712109Aster yellows witches'-broom phytoplasma AYWB, complete genomeATP-dependent Zn protease4e-0757.4
NC_003366:728859:7457037457037478562154Clostridium perfringens str. 13, complete genomecell division protein4e-0757.4
NC_017093:8407968:8427572842757284295872016Actinoplanes missouriensis 431, complete genomecell division protein FtsH4e-0757.4
NC_007963:1190847:1221374122137412224561083Chromohalobacter salexigens DSM 3043, complete genomeAAA ATPase, central region4e-0757.4
NC_015676:1361468:1375002137500213761831182Methanosalsum zhilinae DSM 4017 chromosome, complete genomeMicrotubule-severing ATPase5e-0757
NC_000911:2511514:2529009252900925308921884Synechocystis sp. PCC 6803, complete genomecell division protein; FtsH5e-0757
NC_012988:2507142:2512606251260625138141209Methylobacterium extorquens DM4, complete genomeAAA ATPase8e-0756.6
NC_015474:1185478:1196065119606511985872523Pyrococcus sp. NA2 chromosome, complete genomecell division control protein7e-0756.6
NC_014215:1243125:124852712485271249483957Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,AAA ATPase, central region6e-0756.6
NC_015957:6282179:6300694630069463030002307Streptomyces violaceusniger Tu 4113 chromosome, complete genomeAAA ATPase central domain-containing protein6e-0756.6
NC_015977:3215770:3245193324519332470071815Roseburia hominis A2-183 chromosome, complete genomemicrotubule-severing ATPase8e-0756.2
NC_007948:1574881:1598299159829916003652067Polaromonas sp. JS666, complete genomeAAA ATPase, central region9e-0756.2
NC_000868:378130:3836093836093859962388Pyrococcus abyssi GE5, complete genomecell division control protein 48, aaa family (cdc48-1)1e-0656.2
NC_010995:4403463:4420921442092144222821362Cellvibrio japonicus Ueda107, complete genomeAAA superfamily ATPase1e-0655.8
NC_008817:228029:2390722390722409311860Prochlorococcus marinus str. MIT 9515, complete genomecell division protein FtsH22e-0655.5
NC_005042:830000:8358618358618377771917Prochlorococcus marinus subsp. marinus str. CCMP1375, completeCell division protein FtsH1e-0655.5
NC_000868:1299027:1316200131620013187222523Pyrococcus abyssi GE5, complete genometransitional endoplasmic reticulum atpase1e-0655.5
NC_008095:5585346:5587130558713055891031974Myxococcus xanthus DK 1622, complete genomeATPase, AAA family2e-0655.1
NC_010364:1215489:1221879122187912230631185Halobacterium salinarum R1, complete genomeAAA-type ATPase (transitional ATPase homolog)2e-0655.1
NC_002607:1221158:1232639123263912338231185Halobacterium sp. NRC-1, complete genomeCdc48e2e-0655.1
NC_012803:1094679:1099307109930711003171011Micrococcus luteus NCTC 2665, complete genomeAAA+ family ATPase3e-0654.7
NC_003413:916398:9220369220369245492514Pyrococcus furiosus DSM 3638, complete genomecell division control protein 48, aaa family3e-0654.7
NC_010995:3604695:3604695360469536067012007Cellvibrio japonicus Ueda107, complete genomeputative AAA family ATPase2e-0654.7
NC_013441:4539035:455786945578694558867999Gordonia bronchialis DSM 43247, complete genomeAAA ATPase central domain protein4e-0654.3
NC_008595:3914463:391918039191803920178999Mycobacterium avium 104, complete genomeATPase4e-0653.9
NC_009850:1131492:1131492113149211329641473Arcobacter butzleri RM4018, complete genomecell division protein FtsH5e-0653.9
NC_008609:142471:1772191772191783821164Pelobacter propionicus DSM 2379, complete genomeAAA ATPase, central domain protein6e-0653.5
NC_015514:181773:1991031991032011632061Cellulomonas fimi ATCC 484 chromosome, complete genomeAAA ATPase central domain-containing protein8e-0653.1
NC_016147:2337244:2362711236271123638021092Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative sigma-54-dependent transcriptional regulator1e-0552.8