Pre_GI: BLASTP Hits

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Query: NC_013410:2037840:2042318 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2042318, End: 2042899, Length: 582

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014033:675626:685510685510686088579Prevotella ruminicola 23 chromosome, complete genomexanthine phosphoribosyltransferase1e-66252
NC_015738:2773552:279034627903462790921576Eggerthella sp. YY7918, complete genomeadenine/guanine phosphoribosyltransferase4e-58223
NC_010001:4128034:412803441280344128618585Clostridium phytofermentans ISDg, complete genomexanthine phosphoribosyltransferase1e-55216
NC_017297:1280963:128425812842581284836579Clostridium botulinum F str. 230613 chromosome, complete genomexanthine phosphoribosyltransferase1e-50199
NC_018720:1186058:118931611893161189906591Bifidobacterium asteroides PRL2011 chromosome, complete genomexanthine phosphoribosyltransferase3e-50197
NC_012563:1348500:135361513536151354187573Clostridium botulinum A2 str. Kyoto, complete genomexanthine phosphoribosyltransferase5e-50197
NC_017179:2513804:253226325322632532835573Clostridium difficile BI1, complete genomexanthine phosphoribosyltransferase4e-48191
NC_013315:2505792:252425125242512524823573Clostridium difficile CD196 chromosome, complete genomexanthine phosphoribosyltransferase4e-48191
NC_013316:2585666:260480726048072605379573Clostridium difficile R20291, complete genomexanthine phosphoribosyltransferase4e-48191
NC_018664:1279950:129176012917601292335576Clostridium acidurici 9a chromosome, complete genomexanthine phosphoribosyltransferase Xpt9e-47186
NC_021182:1654903:165683716568371657409573Clostridium pasteurianum BC1, complete genomexanthine phosphoribosyltransferase3e-46184
NC_010337:1445512:146659614665961467162567Heliobacterium modesticaldum Ice1, complete genomexanthine phosphoribosyltransferase6e-44176
NC_017191:1173989:117876511787651179349585Bacillus amyloliquefaciens XH7 chromosome, complete genomexanthine phosphoribosyltransferase7e-43173
NC_017190:2130651:227971522797152280299585Bacillus amyloliquefaciens LL3 chromosome, complete genomexanthine phosphoribosyltransferase7e-43173
NC_017188:1172181:117718811771881177772585Bacillus amyloliquefaciens TA208 chromosome, complete genomexanthine phosphoribosyltransferase7e-43173
NC_017068:130226:141654141654142229576Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xanthine phosphoribosyltransferase4e-42170
NC_020829:5382500:540188754018875402462576Pseudomonas denitrificans ATCC 13867, complete genomexanthine phosphoribosyltransferase2e-41168
NC_020209:4549563:457375345737534574322570Pseudomonas poae RE*1-1-14, complete genomexanthine phosphoribosyltransferase3e-40164
NC_014106:244831:246124246124246702579Lactobacillus crispatus ST1, complete genomeXanthine phosphoribosyltransferase4e-39160
NC_014622:5553628:556722855672285568022795Paenibacillus polymyxa SC2 chromosome, complete genomeadenine/guanine phosphoribosyltransferase3e-38157
NC_009615:1734752:175252817525281753094567Parabacteroides distasonis ATCC 8503 chromosome, complete genomexanthine phosphoribosyltransferase7e-38156
NC_008054:245184:250831250831251400570Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeXanthine phosphoribosyltransferase4e-36150
NC_013171:416279:431048431048431626579Anaerococcus prevotii DSM 20548, complete genomexanthine phosphoribosyltransferase6e-34143
NC_006177:3457637:345887734588773459689813Symbiobacterium thermophilum IAM 14863, complete genomepurine operon repressor2e-1169.3
NC_019978:91483:967949679497618825Halobacteroides halobius DSM 5150, complete genomepur operon repressor2e-1168.9
NC_009633:168266:171020171020171841822Alkaliphilus metalliredigens QYMF chromosome, complete genomepur operon repressor5e-1167.4
NC_000961:1481685:148646414864641487234771Pyrococcus horikoshii OT3, complete genomeadenine phosphoribosyltransferase6e-0857.4
NC_013520:718732:734190734190735008819Veillonella parvula DSM 2008, complete genomepurine operon repressor, PurR1e-0756.2
NC_015518:685885:710251710251710964714Acidianus hospitalis W1 chromosome, complete genomephosphoribosyltransferase1e-0756.2
NC_012121:139741:148189148189149013825Staphylococcus carnosus subsp. carnosus TM300, complete genomepur operon repressor2e-0755.5
NC_017297:3878540:389411438941143894929816Clostridium botulinum F str. 230613 chromosome, complete genomepur operon repressor4e-0754.7
NC_009698:3647955:366621036662103667025816Clostridium botulinum A str. Hall chromosome, complete genomepur operon repressor4e-0754.7
NC_009697:3753527:376910037691003769915816Clostridium botulinum A str. ATCC 19397 chromosome, completepur operon repressor4e-0754.7
NC_010516:3845942:386424838642483865063816Clostridium botulinum B1 str. Okra, complete genomepur operon repressor4e-0754.7
NC_016148:1175999:119057911905791191382804Thermovirga lienii DSM 17291 chromosome, complete genomephosphoribosyltransferase8e-0753.5
NC_014624:3538094:354524035452403546043804Eubacterium limosum KIST612 chromosome, complete genomepurine operon repressor2e-0652.4
NC_007802:3252300:325602032560203256559540Jannaschia sp. CCS1, complete genomeadenine phosphoribosyltransferase2e-0652.4
NC_015966:2337833:235767423576742358207534Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeadenine phosphoribosyltransferase3e-0652
NC_013769:1841908:184190818419081842648741Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein7e-0650.4