Pre_GI Gene

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Host: NC_010001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010001:4128034 Clostridium phytofermentans ISDg, complete genome

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41280344128618585xanthine phosphoribosyltransferaseQuickGO ontologyBLASTP
412885241300121161D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
413003141311941164phosphoserine aminotransferaseQuickGO ontologyBLASTP
41315474132506960hypothetical protein
41325274132805279hypothetical protein
41327574133266510hypothetical protein
41338134134319507phosphoesterase PA-phosphatase relatedQuickGO ontologyBLASTP
41345994137498290023S ribosomal RNAQuickGO ontologyBLASTP
413797141380871175S ribosomal RNAQuickGO ontologyBLASTP
41381734139695152316S ribosomal RNAQuickGO ontologyBLASTP
414041141454955085Glucan endo-13-beta-D-glucosidaseQuickGO ontologyBLASTP
41457674146588822Formamidopyrimidine-DNA glycolase H2TH DNA bindingQuickGO ontologyBLASTP
414697741487161740FAD linked oxidase domain proteinQuickGO ontologyBLASTP
414896341505161554carbohydrate kinase FGGYQuickGO ontologyBLASTP
41505484150904357protein of unknown function DUF1667QuickGO ontologyBLASTP
415090141522231323FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
415221741539471731FAD dependent oxidoreductaseQuickGO ontologyBLASTP