Pre_GI: BLASTP Hits

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Query: NC_013316:81969:82490 Clostridium difficile R20291, complete genome

Start: 82490, End: 83866, Length: 1377

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:3263413:3269030326903032704661437Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein4e-43176
NC_007520:407627:4215274215274229721446Thiomicrospira crunogena XCL-2, complete genomehypothetical protein1e-42174
NC_008322:1186000:1199709119970912011421434Shewanella sp. MR-7, complete genomehypothetical protein2e-42174
NC_002927:506183:5160365160365174691434Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-41169
NC_010501:3671517:3703093370309337045411449Pseudomonas putida W619, complete genomehypothetical protein8e-41168
NC_015381:2859000:2906549290654929079971449Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-36154
NC_020541:2694836:2705471270547127069011431Rhodanobacter sp. 2APBS1, complete genomehypothetical protein8e-36151
NC_012673:2535427:2566208256620825691832976Exiguobacterium sp. AT1b, complete genomehypothetical protein4e-1582.8
NC_018868:2458122:2466786246678624683631578Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomephage protein1e-1377.8
NC_014623:6651798:6677958667795866801352178Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein1e-1274.7
NC_015703:3880903:389009638900963890551456Runella slithyformis DSM 19594 chromosome, complete genome3e-1273.6
NC_015556:819503:8271268271268286821557Pseudomonas fulva 12-X chromosome, complete genomephage protein1e-1067.8
NC_013720:5769910:5826577582657758293872811Pirellula staleyi DSM 6068, complete genomehypothetical protein3e-1067
NC_009464:2687445:2696711269671126986181908Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein5e-1066.2
NC_015224:4426167:4435170443517044376712502Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-1065.9
NC_012731:2974745:298410029841002984996897Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-1065.5
NC_007908:1108494:1141525114152511429671443Rhodoferax ferrireducens T118, complete genomehypothetical protein8e-1065.5
NC_008260:2142311:215052021505202151308789Alcanivorax borkumensis SK2, complete genomeSIR2 family protein1e-0965.1
NC_012560:1677798:168861516886151689499885Azotobacter vinelandii DJ, complete genomehypothetical protein2e-0964.3
NC_021150:1677811:168862816886281689512885Azotobacter vinelandii CA6, complete genomehypothetical protein2e-0964.3
NC_014311:3076519:309878030987803099577798Ralstonia solanacearum PSI07 chromosome, complete genomesir2 domain4e-0963.2
NC_007925:138927:159795159795160622828Rhodopseudomonas palustris BisB18, complete genomeNAD-dependent protein deacetylases, SIR2 family6e-0962.4
NC_013410:1591500:1607735160773516104312697Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-0860.8
NC_010498:4072681:4082773408277340854932721Escherichia coli SMS-3-5, complete genomehypothetical protein2e-0860.5
NC_018581:2768743:277599927759992776808810Gordonia sp. KTR9 chromosome, complete genomehypothetical protein2e-0860.5
NC_006396:2025500:2041665204166520434581794Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein4e-0859.7
NC_014837:2458780:2468381246838124697061326Pantoea sp. At-9b chromosome, complete genomeTIR protein5e-0859.3
NC_008740:257434:2640792640792671893111Marinobacter aquaeolei VT8, complete genomeputative cold-shock DNA-binding domain protein2e-0757.8
NC_008542:483761:4995464995465011621617Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage protein2e-0757.4
NC_008060:2913671:2924028292402829256441617Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage protein2e-0757.4
NC_015711:8424144:843315884331588433793636Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein3e-0757
NC_012793:1718000:1729792172979217312941503Geobacillus sp. WCH70, complete genomehypothetical protein3e-0757
NC_007323:81837:8183781837834621626Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, completehypothetical protein3e-0757
NC_016906:181254:1860811860811875531473Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein5e-0756.2
NC_008800:1090000:1108807110880711103331527Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-0755.8
NC_018678:554675:5701955701955715501356Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein2e-0654.3
NC_015674:1114915:1122144112214411244952352Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein2e-0654.3
NC_008044:1401814:1409890140989014120402151Silicibacter sp. TM1040, complete genomehypothetical protein2e-0653.9
NC_009801:2898426:293600929360092936974966Escherichia coli E24377A, complete genomehypothetical protein3e-0653.5
NC_015572:4063150:4064370406437040661961827Methylomonas methanica MC09 chromosome, complete genomehypothetical protein3e-0653.5
NC_017986:4790482:4826717482671748282131497Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-0653.1
NC_015594:214500:2214942214942229031410Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completehypothetical protein7e-0652.4
NC_004547:1837500:1855523185552318568751353Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-0652.4
NC_020063:2565605:2584689258468925862961608Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein9e-0652