Pre_GI: BLASTP Hits

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Query: NC_013199:2058857:2072281 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2072281, End: 2073300, Length: 1020

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012926:727716:738047738047738976930Streptococcus suis BM407 chromosome, complete genomeglycosyltransferase3e-32139
NC_009442:1216355:122885712288571229786930Streptococcus suis 05ZYH33 chromosome, complete genomepolysaccharide biosynthesis protein/ rhamnosyl transferase3e-32139
NC_012925:1125876:114016511401651141094930Streptococcus suis P1/7, complete genomeglycosyltransferase3e-32139
NC_016641:834500:8377558377558387561002Paenibacillus terrae HPL-003 chromosome, complete genomeglycosyltransferase3e-28126
NC_004567:1066710:108138010813801082306927Lactobacillus plantarum WCFS1, complete genomeglycosyltransferase (rhamnosyltransferase)1e-27124
NC_008532:973510:986185986185987093909Streptococcus thermophilus LMD-9, complete genomeGlycosyltransferase involved in cell wall biogenesis2e-27123
NC_009831:3612206:362373936237393624737999Shewanella sediminis HAW-EB3, complete genomeglycosyltransferase-like protein3e-27122
NC_015850:761500:7692867692867718532568Acidithiobacillus caldus SM-1 chromosome, complete genomepolysaccharide biosynthesis protein1e-26120
NC_017068:1788235:180375818037581804687930Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein6e-25115
NC_019897:4131337:414297841429784143907930Thermobacillus composti KWC4 chromosome, complete genomeglycosyl transferase family protein2e-24113
NC_008781:3688965:369886436988643699796933Polaromonas naphthalenivorans CJ2, complete genomeglycosyl transferase, family 23e-24112
NC_014727:1877764:189585118958511896762912Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glycosyl transferase, family 29e-24111
NC_013714:2086526:212907121290712130012942Bifidobacterium dentium Bd1, complete genomeglycosyl transferase, family 22e-23110
NC_015975:99500:112224112224113135912Lactobacillus ruminis ATCC 27782 chromosome, complete genomeglycosyltransferase2e-23109
NC_011830:4722607:474615547461554747084930Desulfitobacterium hafniense DCB-2, complete genomeglycosyl transferase family 23e-23109
NC_014836:2723060:273428827342882735223936Desulfurispirillum indicum S5 chromosome, complete genomefamily 2 glycosyl transferase1e-22107
NC_004307:1108325:114246811424681143409942Bifidobacterium longum NCC2705, complete genomeprobable glycosyltransferase6e-22105
NC_009438:2939478:294831129483112949243933Shewanella putrefaciens CN-32 chromosome, complete genomeglycosyl transferase family protein4e-22105
NC_009801:2276131:229147622914762292456981Escherichia coli E24377A, complete genomeglycosyl transferase, group 2 family domain protein7e-22104
NC_005966:69689:705637056371492930Acinetobacter sp. ADP1, complete genomeputative glycosyl transferase family 21e-21103
NC_014334:1954333:196242319624231963364942Lactobacillus casei str. Zhang chromosome, complete genomeglycosyl transferase, family 22e-21103
NC_014837:2803447:281529928152992816240942Pantoea sp. At-9b chromosome, complete genomefamily 2 glycosyl transferase2e-21103
NC_015634:359500:373288373288374190903Bacillus coagulans 2-6 chromosome, complete genomeputative glycosyl transferase5e-21102
NC_015577:3113907:312626631262663127186921Treponema azotonutricium ZAS-9 chromosome, complete genomeputative rhamnosyltransferase2e-20100
NC_017328:2153083:216642921664292167334906Shigella flexneri 2002017 chromosome, complete genomedTDP-rhamnosyl transferase rfbG5e-1995.5
NC_008258:2100646:211399321139932114898906Shigella flexneri 5 str. 8401, complete genomedTDP-rhamnosyl transferase5e-1995.5
NC_007946:2231872:224323622432362244171936Escherichia coli UTI89, complete genomeputative rhamnosyltransferase9e-1994.7
NC_007492:4563981:457739745773974578386990Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 21e-1894.4
NC_016077:998741:103797510379751038904930Acidaminococcus intestini RyC-MR95 chromosome, complete genomeglycosyl transferase family protein1e-1894
NC_009615:3308538:332422033242203325068849Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein1e-1894
NC_004578:1153738:1166480116648011674931014Pseudomonas syringae pv. tomato str. DC3000, complete genomeglycosyl transferase, group 2 family protein2e-1893.2
NC_002678:6232000:625120762512076252139933Mesorhizobium loti MAFF303099, complete genomesimilar to glycosyltransferase3e-1892.8
NC_001264:28266:416434164342629987Deinococcus radiodurans R1 chromosome 2, complete sequenceglycosyltransferase3e-1892.8
NC_005296:4574213:459355045935504594539990Rhodopseudomonas palustris CGA009, complete genomeputative glycosyltransferase4e-1892.4
NC_013198:2088780:209897720989772099912936Lactobacillus rhamnosus GG, complete genomepolysaccharide biosynthesis protein / rhamnosyl transferase, glycosyl transferase, family 24e-1892.4
NC_012814:1599241:161710916171091618074966Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase-like protein7e-1891.7
NC_013416:1621469:163062116306211631493873Aggregatibacter actinomycetemcomitans D11S-1, complete genomeglycosyltransferase7e-1891.7
NC_012815:1603916:161682716168271617792966Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase-like protein7e-1891.7
NC_011835:733320:748037748037749002966Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyl transferase family protein7e-1891.7
NC_017214:299637:314349314349315314966Bifidobacterium animalis subsp. lactis BB-12 chromosome, completealpha-L-Rha alpha-1,3-L-rhamnosyltransferase7e-1891.7
NC_017215:1605917:162174316217431622708966Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase7e-1891.7
NC_017216:1603000:161675416167541617719966Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase family 27e-1891.7
NC_017217:1607679:162239616223961623361966Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase-like protein7e-1891.7
NC_012791:821371:8446018446018456051005Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase family 21e-1791.3
NC_007517:2451547:245694924569492457875927Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 21e-1790.9
NC_015578:247266:269679269679270644966Treponema primitia ZAS-2 chromosome, complete genomedTDP-rhamnosyl transferase RfbG3e-1789.4
NC_017033:3013654:301873530187353019670936Frateuria aurantia DSM 6220 chromosome, complete genomeglycosyl transferase family protein5e-1788.6
NC_017047:1862893:188472918847291885655927Rahnella aquatilis HX2 chromosome, complete genomeglycosyl transferase family protein8e-1788.2
NC_009256:3540531:3567501356750135685591059Burkholderia vietnamiensis G4 chromosome 1, complete sequenceglycosyl transferase family protein1e-1687.8
NC_004741:2081649:209499520949952095864870Shigella flexneri 2a str. 2457T, complete genomedTDP-rhamnosyl transferase3e-1686.7
NC_004337:2098736:211212821121282112997870Shigella flexneri 2a str. 301, complete genomedTDP-rhamnosyl transferase3e-1686.7
NC_009253:3272000:329863832986383299564927Desulfotomaculum reducens MI-1 chromosome, complete genomeglycosyl transferase family protein3e-1686.7
NC_007614:1633332:1642763164276316437791017Nitrosospira multiformis ATCC 25196 chromosome 1, completeGlycosyl transferase, family 22e-1686.7
NC_012968:1108687:112638511263851127296912Methylotenera mobilis JLW8, complete genomeglycosyl transferase family 25e-1685.5
NC_014207:1366766:138792213879221388848927Methylotenera sp. 301 chromosome, complete genomeglycosyl transferase family 25e-1685.5
NC_012791:2052923:206799720679972068896900Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase family 23e-1583.2
NC_009512:4408325:441647844164784417404927Pseudomonas putida F1, complete genomeglycosyl transferase, family 25e-1582.4
NC_015677:896673:910912910912911904993Ramlibacter tataouinensis TTB310 chromosome, complete genomeb-glycosyltransferase5e-1582
NC_014207:1366766:138117913811791382093915Methylotenera sp. 301 chromosome, complete genomeglycosyl transferase family 21e-1481.3
NC_013202:59278:7005070050710541005Halomicrobium mukohataei DSM 12286, complete genomeglycosyl transferase family 22e-1480.5
NC_007517:2451547:245911024591102460084975Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 23e-1479.3
NC_020541:625925:645345645345646331987Rhodanobacter sp. 2APBS1, complete genomeputative glycosyltransferase5e-1479
NC_015677:896673:911904911904912899996Ramlibacter tataouinensis TTB310 chromosome, complete genomeb-glycosyltransferase1e-1377.8
NC_009379:304222:309377309377310345969Polynucleobacter sp. QLW-P1DMWA-1, complete genomeglycosyl transferase, family 22e-1377.4
NC_007951:740500:753725753725754723999Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative glycosyl transferase1e-1377.4
NC_013173:3679326:369530736953073696035729Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase family 24e-1375.9
NC_014825:165701:187380187380188072693Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceglycosyl transferase family 24e-1375.9
NC_011979:1590432:161846516184651619178714Geobacter sp. FRC-32, complete genomeglycosyl transferase family 24e-1375.9
NC_009438:2939478:294734329473432948284942Shewanella putrefaciens CN-32 chromosome, complete genomeglycosyl transferase family protein6e-1375.5
NC_007492:4563981:458039245803924581315924Pseudomonas fluorescens PfO-1, complete genomeGlycosyl transferase, family 21e-1274.3
NC_015500:900807:919432919432920187756Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 21e-1274.3
NC_011753:206178:225132225132226067936Vibrio splendidus LGP32 chromosome 1, complete genomeputative dTDP-rhamnosyl transferase1e-1273.9
NC_007404:1964935:197154619715461972271726Thiobacillus denitrificans ATCC 25259, complete genomeglycosyl transferase, group 2 family protein3e-1272.8
NC_013730:5989387:600264860026486003352705Spirosoma linguale DSM 74, complete genomeglycosyl transferase family 28e-1271.6
NC_007517:1468719:149225314922531493155903Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, family 22e-1170.1
NC_012969:142000:148882148882149856975Methylovorus glucosetrophus SIP3-4 chromosome, complete genomefamily 2 glycosyl transferase3e-1169.7
NC_011886:2696671:271076427107642711507744Arthrobacter chlorophenolicus A6, complete genomeglycosyl transferase family 24e-1169.3
NC_009512:4408325:443092244309224431842921Pseudomonas putida F1, complete genomeglycosyl transferase, family 24e-1168.9
NC_002939:1634843:165438816543881655383996Geobacter sulfurreducens PCA, complete genomeglycosyl transferase, group 2 family protein5e-1168.9
NC_008260:1015447:102676010267601027725966Alcanivorax borkumensis SK2, complete genomeglycosyl transferase, group 2 family protein, putative8e-1168.2
NC_015660:296488:308522308522309496975Geobacillus thermoglucosidasius C56-YS93 chromosome, completefamily 2 glycosyl transferase1e-1067.4
NC_014624:1675500:169214616921461692493348Eubacterium limosum KIST612 chromosome, complete genomeglycosyl transferase family protein5e-1065.9
NC_009052:3381943:339144533914453392341897Shewanella baltica OS155, complete genomeglycosyl transferase, family 29e-1064.7
NC_021175:1973880:198555519855551986511957Streptococcus oligofermentans AS 1.3089, complete genomeglycosyltransferase2e-0963.5
NC_011769:3401353:3416110341611034178641755Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeglycosyl transferase family 22e-0860.1
NC_014844:92148:9754897548997492202Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 2 glycosyl transferase3e-0860.1
NC_014012:1676983:170309417030941703987894Shewanella violacea DSS12, complete genomeglycosyl transferase, group 2 family protein3e-0859.7
NC_012883:1817358:183425818342581835178921Thermococcus sibiricus MM 739, complete genomeGlycosyl transferase, family 22e-0756.6
NC_008571:2127369:214493521449352145792858Gramella forsetii KT0803, complete genomeglycosyl transferase, family 23e-0756.2
NC_014541:1165991:118104611810461181759714Ferrimonas balearica DSM 9799 chromosome, complete genomeglycosyl transferase family 24e-0755.8
NC_008541:2989500:300442530044253005195771Arthrobacter sp. FB24 chromosome 1, complete sequenceglycosyl transferase, family 28e-0755.1
NC_012791:821371:8456388456388466961059Variovorax paradoxus S110 chromosome 1, complete genomeglycosyl transferase family 21e-0654.7