Pre_GI: BLASTP Hits

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Query: NC_013199:2058857:2070098 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2070098, End: 2071174, Length: 1077

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012984:1074721:1087734108773410888191086Lactobacillus plantarum JDM1, complete genomepolysaccharide biosynthesis protein1e-71270
NC_004567:1066710:1075304107530410763651062Lactobacillus plantarum WCFS1, complete genomepolysaccharide biosynthesis protein4e-57222
NC_008532:973510:9851189851189861701053Streptococcus thermophilus LMD-9, complete genomeGlycosyltransferase3e-40166
NC_008541:2989500:2999763299976330008811119Arthrobacter sp. FB24 chromosome 1, complete sequenceglycosyl transferase, group 14e-36152
NC_014334:1954333:1966187196618719672691083Lactobacillus casei str. Zhang chromosome, complete genomepolysaccharide biosynthesis protein2e-34147
NC_015311:1612366:1623290162329016243991110Prevotella denticola F0289 chromosome, complete genomeglycosyltransferase group 1 family protein5e-31135
NC_007613:864084:8759318759318769411011Shigella boydii Sb227, complete genomeputative glycosyl transferase5e-1479
NC_014365:1094516:1108176110817611093481173Desulfarculus baarsii DSM 2075 chromosome, complete genomeglycosyl transferase group 13e-1376.3
NC_009620:1307932:1322312132231213236281317Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequencegroup 1 glycosyl transferase4e-1272.8
NC_012483:30784:6501165011662011191Acidobacterium capsulatum ATCC 51196, complete genomeglycosyl transferase, group 1 family7e-1065.5
NC_009633:3522933:3524309352430935254241116Alkaliphilus metalliredigens QYMF chromosome, complete genomegroup 1 glycosyl transferase2e-0963.9
NC_014484:1690272:1709355170935517106111257Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein2e-0963.5
NC_014248:4642149:4643823464382346450941272Nostoc azollae 0708 chromosome, complete genomegroup 1 glycosyl transferase2e-0963.5
NC_019757:4878417:4899413489941349006031191Cylindrospermum stagnale PCC 7417, complete genomeglycosyltransferase4e-0962.8
NC_008701:1363665:1362598136259813636831086Pyrobaculum islandicum DSM 4184, complete genomeglycosyl transferase, group 14e-0962.4
NC_020210:3341976:3403999340399934052221224Geobacillus sp. GHH01, complete genomeglycosyltransferase group 15e-0962.4
NC_015596:1556007:1579534157953415807811248Sinorhizobium meliloti AK83 chromosome 2, complete sequencegroup 1 glycosyl transferase9e-0961.6
NC_013158:2170083:2177795217779521789071113Halorhabdus utahensis DSM 12940, complete genomeglycosyl transferase group 11e-0861.2
NC_015067:2136048:2149579214957921508261248Bifidobacterium longum subsp. longum JCM 1217, complete genomeglycosyltransferase1e-0860.8
NC_012914:6583000:6594352659435265954701119Paenibacillus sp. JDR-2, complete genomeglycosyl transferase group 11e-0860.8
NC_015948:2032399:2054947205494720561371191Haloarcula hispanica ATCC 33960 chromosome chromosome I, completehexosyltransferase/glycosyltransferase2e-0860.5
NC_014355:2775979:2787650278765027887741125Candidatus Nitrospira defluvii, complete genomeglycosyl transferase group 1 protein3e-0860.1
NC_009138:1138917:1152106115210611532331128Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative glycosyl transferases group 13e-0860.1
NC_013222:2209340:2219054221905422201271074Robiginitalea biformata HTCC2501, complete genomewlac protein3e-0859.7
NC_013665:849508:8917858917858927861002Methanocella paludicola SANAE, complete genomeputative glycosyltransferase3e-0859.7
NC_012032:1827244:1827244182724418285241281Chloroflexus sp. Y-400-fl, complete genomeglycosyl transferase group 14e-0859.3
NC_010175:1825878:1825878182587818271581281Chloroflexus aurantiacus J-10-fl, complete genomeglycosyl transferase group 14e-0859.3
NC_014961:741209:7533757533757549251551Desulfurococcus mucosus DSM 2162 chromosome, complete genomegroup 1 glycosyl transferase4e-0859.3
NC_014972:2371647:2386603238660323878471245Desulfobulbus propionicus DSM 2032 chromosome, complete genomegroup 1 glycosyl transferase5e-0858.9
NC_015680:755500:7743017743017754461146Pyrococcus yayanosii CH1 chromosome, complete genomeglycosyltransferase5e-0858.9
NC_003552:4637764:4637764463776446388191056Methanosarcina acetivorans C2A, complete genomemannosyltransferase B7e-0858.5
NC_007644:1694879:1694879169487916959791101Moorella thermoacetica ATCC 39073, complete genomeGlycosyl transferase, group 11e-0758.2
NC_009051:657000:6648036648036658491047Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 19e-0858.2
NC_009664:1195630:1204315120431512055171203Kineococcus radiotolerans SRS30216, complete genomeglycosyl transferase group 19e-0858.2
NC_011992:571000:5755745755745767191146Acidovorax ebreus TPSY, complete genomeglycosyl transferase group 11e-0757.8
NC_015636:966000:9913859913859925001116Methanothermococcus okinawensis IH1 chromosome, complete genomegroup 1 glycosyl transferase1e-0757.8
NC_010364:3322:5867558675597481074Halobacterium salinarum R1, complete genomeputative glycosyltransferase, type 11e-0757.8
NC_019967:29448:4827448274494581185Natrinema pellirubrum DSM 15624 plasmid pNATPE01, completeglycosyltransferase1e-0757.8
NC_011894:6888562:6949870694987069511441275Methylobacterium nodulans ORS 2060, complete genomeglycosyl transferase group 12e-0757.4
NC_002607:3322:5766057660586611002Halobacterium sp. NRC-1, complete genomeLPS glycosyltransferase2e-0757.4
NC_013156:127000:1453191453191463681050Methanocaldococcus fervens AG86, complete genomeglycosyl transferase group 11e-0757.4
NC_012914:6583000:6596594659659465983511758Paenibacillus sp. JDR-2, complete genomeglycosyl transferase group 12e-0757
NC_006177:2883476:2909176290917629102611086Symbiobacterium thermophilum IAM 14863, complete genomeputative glycosyl transferase2e-0757
NC_003364:225500:2421682421682432501083Pyrobaculum aerophilum str. IM2, complete genomeglycosyltransferase (type 1)3e-0756.6
NC_011529:1722829:1739589173958917407101122Thermococcus onnurineus NA1, complete genomephosphatidylinositol glycantransferase-class A3e-0756.6
NC_000854:723000:7456957456957467861092Aeropyrum pernix K1, complete genomeglycosyl transferase, group 12e-0756.6
NC_009523:1025556:1049781104978110509981218Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase3e-0756.2
NC_009052:71058:7804478044791561113Shewanella baltica OS155, complete genomeglycosyl transferase, group 13e-0756.2
NC_008698:1612873:1656100165610016573801281Thermofilum pendens Hrk 5, complete genomeglycosyl transferase, group 14e-0756.2
NC_007614:261588:2730342730342741101077Nitrosospira multiformis ATCC 25196 chromosome 1, completeGlycosyl transferase, group 15e-0755.8
NC_015942:1167785:1178360117836011795681209Acidithiobacillus ferrivorans SS3 chromosome, complete genomegroup 1 glycosyl transferase5e-0755.8
NC_010364:787766:7984887984887996841197Halobacterium salinarum R1, complete genomeputative glycosyltransferase, type 14e-0755.8
NC_002607:795777:8064998064998076951197Halobacterium sp. NRC-1, complete genomehypothetical protein4e-0755.8
NC_012490:3094857:3119109311910931202361128Rhodococcus erythropolis PR4, complete genomemannosyltransferase PimA4e-0755.8
NC_014910:755192:7856387856387867801143Alicycliphilus denitrificans BC chromosome, complete genomesugar transferase, pep-cterm/epsh1 system associated5e-0755.5
NC_015948:2032399:2045277204527720464131137Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeputative glycosyltransferase6e-0755.5
NC_014926:608894:6221636221636232121050Thermovibrio ammonificans HB-1 chromosome, complete genomeglycosyl transferase group 18e-0755.1
NC_017082:6444522:650460565046056505009405Bradyrhizobium sp. S23321, complete genomeglycosyl transferase family protein8e-0755.1
NC_000853:648075:6561406561406573061167Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein, putative7e-0755.1
NC_012804:816961:8368448368448383551512Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 11e-0654.7
NC_003901:1346281:1351948135194813530871140Methanosarcina mazei Go1, complete genomeglycosyltransferase1e-0654.7
NC_016815:1085462:1096227109622710974321206Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceputative glycosyltransferase1e-0654.7
NC_014973:1136794:1159342115934211622632922Geobacter sp. M18 chromosome, complete genomegroup 1 glycosyl transferase1e-0654.7
NC_019942:686564:7122217122217133601140Aciduliprofundum sp. MAR08-339, complete genomeglycosyltransferase1e-0654.7
NC_015388:2434922:2447864244786424489311068Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeglycosyl transferase group 11e-0654.7
NS_000195:219785:2749902749902761561167Candidatus Cloacamonas acidaminovoransputative Phosphatidylinositol N-acetylglucosaminyltransferase9e-0754.7
NC_014935:1389000:1417905141790514189631059Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeglycosyl transferase group 11e-0654.3
NC_003869:948000:9528129528129539361125Thermoanaerobacter tengcongensis MB4, complete genomepredicted glycosyltransferase1e-0654.3
NC_014328:180482:2031582031582042761119Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative glycosyltransferase1e-0654.3
NC_011884:1591430:1591430159143015927911362Cyanothece sp. PCC 7425, complete genomeglycosyl transferase group 11e-0654.3
NC_009051:657000:6721416721416732231083Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 12e-0653.9
NC_016112:3103716:3127753312775331289101158Methylomicrobium alcaliphilum chromosome, complete genomesugar transferase2e-0653.9
NC_013642:400651:4214314214314225971167Thermotoga naphthophila RKU-10, complete genomeglycosyl transferase group 12e-0653.9
NC_002689:903798:903798903798904250453Thermoplasma volcanium GSS1, complete genomePredicted glycosyltransferase2e-0653.9
NC_015732:1636368:1657157165715716582841128Spirochaeta caldaria DSM 7334 chromosome, complete genomeglycosyl transferase group 12e-0653.9
NC_014010:1020488:1046148104614810472871140Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeglycosyl transferase, group 12e-0653.5
NC_014166:2498500:2546649254664925477611113Arcobacter nitrofigilis DSM 7299 chromosome, complete genomegroup 1 glycosyl transferase2e-0653.5
NC_013665:849508:8927868927868940091224Methanocella paludicola SANAE, complete genomeputative glycosyltransferase2e-0653.5
NC_003901:775500:7804977804977815581062Methanosarcina mazei Go1, complete genomemannosyltransferase2e-0653.5
NC_015914:917124:9158479158479171361290Cyclobacterium marinum DSM 745 chromosome, complete genomegroup 1 glycosyl transferase3e-0653.1
NC_011725:5169135:5187606518760651887391134Bacillus cereus B4264 chromosome, complete genomegroup 1 glycosyl transferase3e-0653.1
NC_002971:780502:7945157945157956481134Coxiella burnetii RSA 493, complete genomeglycosyl transferase, group 1 family protein3e-0653.1
NC_011527:1113217:1118014111801411191471134Coxiella burnetii CbuG_Q212, complete genomealpha-D-QuiNAc alpha-1,3-galactosyltransferase3e-0653.1
NC_010117:980313:9851109851109862521143Coxiella burnetii RSA 331, complete genomeglycosyl transferase, group 1 family protein3e-0653.1
NC_011528:647401:6624076624076635401134Coxiella burnetii CbuK_Q154, complete genomealpha-D-QuiNAc alpha-1,3-galactosyltransferase3e-0653.1
NC_015572:1421782:1453537145353714546851149Methylomonas methanica MC09 chromosome, complete genomesugar transferase, PEP-CTERM/EpsH1 system associated3e-0653.1
NC_014169:1099024:1103419110341911046691251Bifidobacterium longum subsp. longum JDM301 chromosome, completeglycogen synthase4e-0652.8
NC_004307:579729:6019336019336031831251Bifidobacterium longum NCC2705, complete genomepossible glycosyltransferase4e-0652.8
NC_010816:621849:6412026412026424521251Bifidobacterium longum DJO10A, complete genomeGlycosyltransferase4e-0652.8
NC_011593:1622260:1639533163953316407831251Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycogen synthase4e-0652.8
NC_017218:1042298:1058284105828410595341251Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomestarch synthase4e-0652.8
NC_017219:1622050:1639323163932316405731251Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative glycosyltransferase4e-0652.8
NC_015052:1094825:1097421109742110986711251Bifidobacterium longum subsp. infantis 157F, complete genomeglycosyltransferase4e-0652.8
NC_017221:1222963:1246593124659312478431251Bifidobacterium longum subsp. longum KACC 91563 chromosome,glycosyltransferase4e-0652.8
NC_009675:5187452:5193839519383951949721134Anaeromyxobacter sp. Fw109-5 chromosome, complete genomegroup 1 glycosyl transferase3e-0652.8
NC_010804:782222:7962337962337974531221Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein6e-0652.4
NC_010084:2717443:2727320272732027285401221Burkholderia multivorans ATCC 17616 chromosome 1, completegroup 1 glycosyl transferase6e-0652.4
NC_014507:1403000:1437588143758814386671080Methanoplanus petrolearius DSM 11571 chromosome, complete genomeglycosyl transferase group 1 protein5e-0652.4
NC_010364:3322:6162461624627121089Halobacterium salinarum R1, complete genomeputative glycosyltransferase, type 16e-0652
NC_013757:421760:4421434421434443952253Geodermatophilus obscurus DSM 43160, complete genomeglycosyl transferase group 16e-0652
NC_002607:3322:6060960609616251017Halobacterium sp. NRC-1, complete genomeLPS biosynthesis protein7e-0652
NC_014355:2321957:2337284233728423385191236Candidatus Nitrospira defluvii, complete genomeputative glycosyl transferase, group 17e-0652
NC_007298:2568851:2600168260016826012741107Dechloromonas aromatica RCB, complete genomeGlycosyl transferase, group 11e-0551.6