Pre_GI: BLASTP Hits

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Query: NC_013199:1407742:1408629 Lactobacillus rhamnosus Lc 705, complete genome

Start: 1408629, End: 1409120, Length: 492

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019842:2134803:216097721609772161462486Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,dihydrofolate reductase2e-22104
NC_009725:2072475:210295421029542103439486Bacillus amyloliquefaciens FZB42, complete genomeDfrA2e-22104
NC_012559:731859:754594754594755097504Laribacter hongkongensis HLHK9, complete genomeDihydrofolate reductase2e-1994.7
NC_009465:938378:961807961807962298492Candidatus Vesicomyosocius okutanii HA, complete genomedihydrofolate reductase2e-1891.7
NC_002939:579087:599582599582600064483Geobacter sulfurreducens PCA, complete genomedihydrofolate reductase1e-1789
NC_020125:1853208:185573318557331856446714Riemerella anatipestifer RA-CH-2, complete genomeDihydrofolate reductase2e-1788.2
NC_015222:983647:998047998047998550504Nitrosomonas sp. AL212 chromosome, complete genomedihydrofolate reductase region4e-1787
NC_014752:324832:338541338541339071531Neisseria lactamica ST-640, complete genomedihydrofolate reductase1e-1685.5
NC_007622:1397407:139740713974071397886480Staphylococcus aureus RF122, complete genometrimethoprim-sensitive dihydrofolate reductase2e-1685.1
NC_017342:1848031:188789018878901888369480Staphylococcus aureus subsp. aureus TCH60 chromosome, completedihydrofolate reductase2e-1685.1
NC_002677:1822500:183247618324761832973498Mycobacterium leprae TN, complete genomedihydrofolate reductase3e-1684.7
NC_013422:1755875:178450517845051785002498Halothiobacillus neapolitanus c2, complete genomeDihydrofolate reductase4e-1684
NC_016941:1411500:141236614123661412845480Staphylococcus aureus subsp. aureus MSHR1132, complete genomedihydrofolate reductase type I1e-1582.4
NC_014643:382500:399140399140399826687Rothia dentocariosa ATCC 17931 chromosome, complete genomedihydrofolate reductase2e-1582
NC_008767:1888950:190370319037031904191489Neisseria meningitidis FAM18, complete genomedihydrofolate reductase2e-1581.6
NC_018748:1311465:133017313301731330667495Emticicia oligotrophica DSM 17448 chromosome, complete genomedihydrofolate reductase region3e-1580.9
NC_009749:221311:224102224102224644543Francisella tularensis subsp. holarctica FTA, complete genomedihydrofolate reductase4e-1580.5
NC_008369:221382:224173224173224715543Francisella tularensis subsp. holarctica OSU18, complete genomedihydrofolate reductase4e-1580.5
NC_007880:221674:224465224465225007543Francisella tularensis subsp. holarctica, complete genomedihydrofolate reductase type I4e-1580.5
NC_006570:324974:327765327765328265501Francisella tularensis subsp. tularensis Schu 4, complete genomedihydrofolate reductase type I8e-1579.7
NC_008245:324926:327717327717328217501Francisella tularensis subsp. tularensis FSC 198, complete genomedihydrofolate reductase type I8e-1579.7
NC_009257:1636633:166358816635881664112525Francisella tularensis subsp. tularensis WY96-3418 chromosome,dihydrofolate reductase type I7e-1579.7
NC_008601:246583:249457249457249999543Francisella tularensis subsp. novicida U112, complete genomedihydrofolate reductase type I7e-1579.7
NC_010677:1621500:164789016478901648432543Francisella tularensis subsp. mediasiatica FSC147, complete genomedihydrofolate reductase7e-1579.7
NC_016933:324883:327674327674328216543Francisella tularensis TIGB03 chromosome, complete genomeDihydrofolate reductase7e-1579.7
NC_016933:400790:403581403581404123543Francisella tularensis TIGB03 chromosome, complete genomeDihydrofolate reductase7e-1579.7
NC_016937:324883:327674327674328216543Francisella tularensis subsp. tularensis TI0902 chromosome,Dihydrofolate reductase7e-1579.7
NC_015696:220798:227489227489227986498Francisella sp. TX077308 chromosome, complete genomedihydrofolate reductase1e-1479
NC_007973:2773427:279444427944442794944501Ralstonia metallidurans CH34 chromosome 1, complete sequencedihydrofolate reductase region1e-1479
NC_021182:2360500:238190423819042382407504Clostridium pasteurianum BC1, complete genomedihydrofolate reductase2e-1478.6
NC_020388:1479568:154734815473481547851504Natronomonas moolapensis 8.8.11 complete genomedihydrofolate reductase3e-1477.8
NC_015977:935798:961220961220961711492Roseburia hominis A2-183 chromosome, complete genomedihydrofolate reductase4e-1477
NC_012590:850130:865346865346865891546Corynebacterium aurimucosum ATCC 700975, complete genomeDihydrofolate reductase1e-1375.9
NC_008212:1685367:169890116989011699488588Haloquadratum walsbyi DSM 16790, complete genomedihydrofolate reductase1e-1375.5
NC_013851:2441407:245891824589182459436519Allochromatium vinosum DSM 180 chromosome, complete genomeDihydrofolate reductase1e-1375.5
NC_002528:148274:149125149125149610486Buchnera aphidicola str. APS (Acyrthosiphon pisum), completedihydrofolate reductase2e-1375.1
NC_011833:147426:149143149143149628486Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,dihydrofolate reductase2e-1375.1
NC_015673:397947:415915415915416598684Corynebacterium resistens DSM 45100 chromosome, complete genomedihydrofolate reductase2e-1375.1
NC_010159:770172:792326792326792808483Yersinia pestis Angola, complete genomedihydrofolate reductase4e-1373.9
NC_002935:781172:797137797137797640504Corynebacterium diphtheriae NCTC 13129, complete genomePutative folate reductase4e-1373.9
NC_007164:511171:527465527465528169705Corynebacterium jeikeium K411, complete genomehypothetical protein4e-1373.9
NC_018720:1611213:163123216312321631900669Bifidobacterium asteroides PRL2011 chromosome, complete genomedihydrofolate reductase5e-1373.6
NC_008826:170609:195098195098195877780Methylibium petroleiphilum PM1 plasmid RPME01, complete sequenceDihydrofolate reductase6e-1373.2
NC_015683:732668:743918743918744445528Corynebacterium ulcerans BR-AD22 chromosome, complete genomedihydrofolate reductase6e-1373.2
NC_017256:144854:149247149247149729483Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,dihydrofolate reductase9e-1372.8
NC_013316:81969:819698196982463495Clostridium difficile R20291, complete genomedihydrofolate reductase region3e-1270.9
NC_009615:4563831:456960045696004570097498Parabacteroides distasonis ATCC 8503 chromosome, complete genomedihydrofolate reductase3e-1270.9
NC_004545:141478:146011146011146505495Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomedihydrofolate reductase7e-1269.7
NC_004061:146862:149938149938150423486Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomedihydrofolate reductase2e-1168.6
NC_012778:1819559:184213918421391842612474Eubacterium eligens ATCC 27750, complete genomedihydrofolate reductase2e-1168.2
NC_014448:65000:793607936079839480Mycoplasma hyorhinis HUB-1 chromosome, complete genomeBifunctional protein including dihydrofolate reductase and deoxycytidylate deaminase family domains2e-1167.8
NC_016838:85487:108291108291108761471Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,putative dihydrofolate reductase3e-1167.4
NC_015703:4933430:498323349832334983724492Runella slithyformis DSM 19594 chromosome, complete genomedihydrofolate reductase region4e-1167
NC_013721:430000:434731434731435390660Gardnerella vaginalis 409-05, complete genomedihydrofolate reductase9e-1166.2
NC_014330:2409559:242795924279592428459501Brachyspira pilosicoli 95/1000 chromosome, complete genomedihydrofolate reductase2e-1065.1
NC_019908:852230:851733851733852233501Brachyspira pilosicoli P43/6/78 chromosome, complete genomedihydrofolate reductase2e-1064.7
NC_011146:3206000:322812032281203229040921Geobacter bemidjiensis Bem, complete genomedihydrofolate reductase region2e-1064.7
NC_017191:1173989:131123313112331311751519Bacillus amyloliquefaciens XH7 chromosome, complete genomedihydrofolate reductase3e-1064.3
NC_017188:1172181:130965613096561310174519Bacillus amyloliquefaciens TA208 chromosome, complete genomeDihydrofolate reductase3e-1064.3
NC_015501:938196:956944956944957465522Porphyromonas asaccharolytica DSM 20707 chromosome, completeDihydrofolate reductase7e-1063.2
NC_017190:2130651:214683421468342147340507Bacillus amyloliquefaciens LL3 chromosome, complete genomeDihydrofolate reductase2e-0961.6
NC_018604:1329228:134843413484341348934501Brachyspira pilosicoli WesB complete genomedihydrofolate reductase2e-0961.6
NC_010410:3606826:367691636769163677389474Acinetobacter baumannii AYE, complete genomeDihydrofolate reductase type 1 (Dihydrofolate reductase type I) (Trimethoprim resistance protein)2e-0858.5
NC_017328:3935185:394699339469933947466474Shigella flexneri 2002017 chromosome, complete genometrimethoprim resistance protein,type I dihydrofolate reductase2e-0858.5
NC_009651:19909:310083100831799792Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,putative dihydrofolate reductase3e-0857.4
NC_016632:170000:209977209977210462486Serratia symbiotica str. 'Cinara cedri' chromosome, completedihydrofolate reductase4e-0857.4
NC_014039:1766049:177976717797671780237471Propionibacterium acnes SK137 chromosome, complete genomedihydrofolate reductase8e-0856.2
NC_016516:1751336:176862717686271769097471Propionibacterium acnes TypeIA2 P.acn33 chromosome, completedihydrofolate reductase1e-0755.5
NC_011753:2018500:202857920285792029130552Vibrio splendidus LGP32 chromosome 1, complete genomeDihydrofolate reductase4e-0753.9
NC_011751:4992500:499427849942784994751474Escherichia coli UMN026 chromosome, complete genome1e-0652.8