Pre_GI: BLASTP Hits

Some Help

Query: NC_013198:2088780:2110307 Lactobacillus rhamnosus GG, complete genome

Start: 2110307, End: 2110807, Length: 501

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:2058857:208128920812892081789501Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)6e-90329
NC_014334:1954333:197509019750901975590501Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein7e-80295
NC_010999:2155714:217471521747152175215501Lactobacillus casei, complete genomeCitrulline cluster-linked9e-80295
NC_012467:916000:933548933548934057510Streptococcus pneumoniae P1031, complete genomecitrulline cluster-linked protein7e-1993.2
NC_004193:375416:467140467140467622483Oceanobacillus iheyensis HTE831, complete genomecitrulline related protein4e-1890.9
NC_005945:1523014:154252715425271543012486Bacillus anthracis str. Sterne, complete genomehypothetical protein1e-1789
NC_007530:1523060:154257315425731543058486Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein1e-1789
NC_003997:1522937:154245015424501542935486Bacillus anthracis str. Ames, complete genomehypothetical protein1e-1789
NC_012659:1522960:154247315424731542958486Bacillus anthracis str. A0248, complete genomehypothetical protein1e-1789
NC_005957:1549201:156871415687141569199486Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein1e-1789
NC_006274:1547819:156733215673321567817486Bacillus cereus E33L, complete genomehypothetical protein1e-1789
NC_011773:1590560:161007316100731610558486Bacillus cereus AH820 chromosome, complete genomehypothetical protein1e-1789
NC_014614:260782:279379279379279864486Clostridium sticklandii, complete genomeCitrulline cluster-linked gene4e-1167.4
NC_015425:2277570:227757022775702278052483Clostridium botulinum BKT015925 chromosome, complete genomecitrulline cluster-linked protein8e-1062.8
NC_008593:2020473:202639720263972026882486Clostridium novyi NT, complete genomecitrulline cluster-linked gene2e-0961.6
NC_009922:42696:567755677557257483Alkaliphilus oremlandii OhILAs, complete genomeprotein of unknown function DUF9882e-0858.5
NC_019978:686362:703728703728704204477Halobacteroides halobius DSM 5150, complete genomehypothetical protein5e-0857.4
NC_011297:1296968:131588313158831316356474Dictyoglomus thermophilum H-6-12, complete genometransporter1e-0756.2
NC_010001:109893:127890127890128408519Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF9881e-0755.5
NC_014654:1529500:153184615318461532295450Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function DUF9885e-0650.4
NC_016894:77853:100002100002100502501Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein7e-0650.1