Pre_GI: BLASTP Hits

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Query: NC_012988:4262631:4266669 Methylobacterium extorquens DM4, complete genome

Start: 4266669, End: 4267061, Length: 393

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Methylobacterium extorquens DM4 was isolated from soil contaminated with halogenated (chlorine-containing) hydrocarbons. This organism is able to use dichloromethane as a sole carbon and energy source. Dichloromethane, an industrial solvent, is toxic and carcinogenic. This compound is water soluble and can easily contaminate groundwater. Methylobacterium chloromethanicum was isolated from soil at a petrochemical factory in Tatarstan, Russia. This organism is able to grow using chloromethane as the sole carbon and energy source.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:276953:292315292315292770456Methylobacterium chloromethanicum CM4, complete genomepeptidase S24 and S26 domain protein2e-67253
NC_010725:356609:361808361808362272465Methylobacterium populi BJ001, complete genomepeptidase S24 and S26 domain protein9e-66248
NC_010510:534024:541392541392541844453Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepeptidase S24 and S26 domain protein5e-48189
NC_011894:585637:622354622354622869516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-40164
NC_011894:4013830:401775640177564018211456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein2e-40163
NC_011894:7109374:711828971182897118744456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein1e-36151
NC_011894:5056901:507563950756395076154516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein1e-32137
NC_006576:2683467:709970997659561Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V1e-24112
NC_007604:1586243:160612916061291606689561Synechococcus elongatus PCC 7942, complete genomeDNA polymerase V1e-24112
NC_016002:1741109:175018817501881750616429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein4e-24109
NC_016002:2179969:218853921885392188967429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein4e-24109
NC_011761:1499500:151324615132461513740495Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuD protein1e-23108
NC_014532:3596097:362965336296533630096444Halomonas elongata DSM 2581, complete genomehypothetical protein6e-22102
NC_012559:1497548:152788615278861528506621Laribacter hongkongensis HLHK9, complete genomeUmuD protein1e-21101
NC_011662:2320100:233366623336662334121456Thauera sp. MZ1T, complete genomepeptidase S24 and S26 domain protein1e-21101
NC_014394:2577949:258904525890452589485441Gallionella capsiferriformans ES-2 chromosome, complete genomePeptidase S24/S26A/S26B, conserved region2e-21101
NC_015167:1154497:115575611557561156190435Cellulophaga lytica DSM 7489 chromosome, complete genomepeptidase S24/S26A/S26B2e-21100
NC_015970:19850:238292382924263435Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completepeptidase S24/S26A/S26B4e-2199.8
NC_007516:1086948:110718511071851107616432Synechococcus sp. CC9605, complete genomeputative SOS mutagenesis protein UmuD7e-2199.4
NC_016830:3869572:387722238772223877647426Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuD1e-2098.2
NC_015424:2726223:276526527652652765627363Aeromonas veronii B565 chromosome, complete genomepeptidase S24-like domain-containing protein2e-2097.4
NC_015572:2186394:218769221876922188171480Methylomonas methanica MC09 chromosome, complete genomepeptidase S24/S26A/S26B3e-2097.1
NC_009927:253250:254670254670255101432Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceSOS mutagenesis protein UmuD, putative5e-2096.3
NC_012969:1574330:159093015909301591391462Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidase S24 and S26 domain-containing protein6e-2096.3
NC_008341:29038:461294612946572444Nitrosomonas eutropha C91 plasmid1, complete sequenceputative prophage repressor1e-1995.1
NC_016609:8251438:825282782528278253261435Niastella koreensis GR20-10 chromosome, complete genomeSOS response UmuD protein2e-1994.7
NC_013282:1842412:184946718494671849934468Cronobacter turicensis, complete genomeProtein umuD2e-1994.4
NC_020260:1293860:130024713002471300684438Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuD3e-1994
NC_015410:2351464:238028123802812380712432Pseudomonas mendocina NK-01 chromosome, complete genomeprotein MucA3e-1994
NC_009436:2395913:240450524045052404924420Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuD4e-1993.6
NC_012108:442493:456512456512456931420Desulfobacterium autotrophicum HRM2, complete genomeUmuD14e-1993.6
NC_009453:36599:513145131451745432Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuD-like protein4e-1993.6
NC_009512:5632591:565849256584925658920429Pseudomonas putida F1, complete genomeputative prophage repressor3e-1993.6
NC_009792:1739970:174737317473731747789417Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1993.2
NC_004129:5373886:542090954209095421361453Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein A4e-1993.2
NC_010473:1245284:127023112702311270650420Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit D9e-1992.4
NC_009801:1296488:132144813214481321867420Escherichia coli E24377A, complete genomeprotein UmuD9e-1992.4
NC_008253:1228485:125123812512381251657420Escherichia coli 536, complete genomeUmuD protein9e-1992.4
NC_011751:1446073:147704214770421477461420Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuD9e-1992.4
NC_012967:1205985:123091712309171231336420Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuD9e-1992.4
NC_006347:2190000:219226021922602192703444Bacteroides fragilis YCH46, complete genomeerror-prone repair: SOS-response transcriptional repressor UmuD homolog8e-1992.4
NC_016776:2237404:224094922409492241392444Bacteroides fragilis 638R, complete genomeputative UmuD/RumA DNA repair protein8e-1992.4
NC_015761:1599000:160588716058871606315429Salmonella bongori NCTC 12419, complete genomeDNA repair protein7e-1992.4
NC_009648:1541699:159551215955121595931420Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuD1e-1892
NC_016514:2476359:248828724882872488781495Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuD1e-1892
NC_007626:2204767:224721922472192247689471Magnetospirillum magneticum AMB-1, complete genomeSOS-response transcriptional repressors1e-1892
NC_011745:1287714:131060513106051311024420Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuD1e-1892
NC_003228:2245181:224994922499492250386438Bacteroides fragilis NCTC 9343, complete genomeputative UmuD/RumA DNA repair protein9e-1992
NC_011283:3177350:318657131865713187053483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD1e-1891.7
NC_011283:2836000:289026328902632890745483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD1e-1891.7
NC_011742:1221416:124553912455391245958420Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuD2e-1891.3
NC_004431:1443968:146808314680831468502420Escherichia coli CFT073, complete genomeUmuD protein2e-1891.3
NC_009436:2056000:206974720697472070181435Enterobacter sp. 638, complete genomeprophage repressor2e-1890.9
NC_016445:89500:106849106849107298450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V3e-1890.5
NC_012668:3037345:303929130392913039740450Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuD3e-1890.5
NC_014733:1223359:123140312314031231840438Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein3e-1890.5
NC_010172:3894652:389928038992803899432153Methylobacterium extorquens PA1, complete genome3e-1890.5
NC_010172:3894652:389943338994333899633201Methylobacterium extorquens PA1, complete genomehypothetical protein4e-1890.1
NC_021066:1778000:178527517852751785694420Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuD4e-1889.7
NC_008570:2216736:225027522502752250697423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeumuD protein6e-1889.4
NC_011601:1315746:133733613373361337755420Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuD6e-1889.4
NC_010554:2646806:272478627247862725235450Proteus mirabilis HI4320, complete genomeDNA repair protein8e-1889
NC_016810:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein8e-1889
NC_016856:2085283:209256820925682092987420Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuD8e-1889
NC_016857:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuD8e-1889
NC_016863:2029340:204076020407602041179420Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuD8e-1889
NC_007963:1552761:156563415656341566074441Chromohalobacter salexigens DSM 3043, complete genomeputative prophage repressor7e-1889
NC_004631:948054:981317981317981736420Salmonella enterica subsp. enterica serovar Typhi Ty2, completeUmuD protein1e-1788.6
NC_015566:3269469:328448832844883284913426Serratia sp. AS12 chromosome, complete genomepeptidase S24/S26A/S26B2e-1788.2
NC_011881:1:390939094340432Arthrobacter chlorophenolicus A6 plasmid pACHL02, completepeptidase S24 and S26 domain protein5e-1786.3
NC_008255:1701195:171908717190871719515429Cytophaga hutchinsonii ATCC 33406, complete genomepeptidase, S24 family, UV repair protein1e-1684.7
NC_007941:11319:558295582956266438Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein2e-1684.3
NC_008740:1357312:136883113688311369268438Marinobacter aquaeolei VT8, complete genomeputative prophage repressor2e-1684.3
NC_006856:95830:100863100863101300438Salmonella enterica subsp. enterica serovar Choleraesuis strImpA3e-1684
NC_020064:1962172:197446219744621974884423Serratia marcescens FGI94, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase5e-1683.2
NC_014305:97055:112117112117112545429Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit4e-1683.2
NC_014842:19411:458674586746373507Pantoea sp. At-9b plasmid pPAT9B05, complete sequencepeptidase S24/S26A/S26B8e-1682.4
NC_005071:671084:688212688212688706495Prochlorococcus marinus str. MIT 9313, complete genomeputative SOS mutagenesis protein UmuD8e-1682.4
NC_014910:1912552:191889019188901919375486Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein1e-1582
NC_017047:1934430:194357819435781944000423Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuD1e-1582
NC_008570:1143578:116544011654401165883444Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuD1e-1582
NC_015424:3520783:355284035528403553283444Aeromonas veronii B565 chromosome, complete genomeprotein UmuD1e-1581.6
NC_009434:3611738:363139136313913631822432Pseudomonas stutzeri A1501, complete genomeultraviolet light resistance protein A2e-1581.3
NC_007275:1:175717572182426Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeultraviolet light resistance protein A3e-1580.5
NC_007005:1605000:161250616125061612940435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B4e-1580.1
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-1579.3
NC_020911:1859210:188108418810841881518435Octadecabacter antarcticus 307, complete genomeUV-repair and mutation protein UmuD6e-1579.3
NC_015851:10915:328603286033324465Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceSOS-response repressor and protease LexA1e-1479
NC_016816:4129299:417061241706124171037426Pantoea ananatis LMG 5342, complete genomeUV protection protein2e-1477.8
NC_014304:77715:878618786188307447Erwinia billingiae Eb661 plasmid pEB102, complete sequenceProtein SamA3e-1477
NC_007005:830467:840487840487840921435Pseudomonas syringae pv. syringae B728a, complete genomePeptidase S24, S26A and S26B4e-1476.6
NC_012988:5516872:552894655289465529239294Methylobacterium extorquens DM4, complete genomehypothetical protein5e-1476.3
NC_013446:2961647:297934429793442979754411Comamonas testosteroni CNB-2, complete genomeDNA polymerase V8e-1475.9
NC_014323:3976351:398335939833593983784426Herbaspirillum seropedicae SmR1 chromosome, complete genomeSOS mutagenesis protein8e-1475.9
NC_005966:2653945:267389626738962674522627Acinetobacter sp. ADP1, complete genomecomponent of DNA polymerase V1e-1375.1
NC_013716:4306695:433331543333154333674360Citrobacter rodentium ICC168, complete genomeputative SOS response protein3e-1373.6
NC_015703:4483500:451653045165304516979450Runella slithyformis DSM 19594 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region6e-1372.8
NC_003902:3514000:352392035239203524399480Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit9e-1372
NC_020541:1786500:180581018058101806289480Rhodanobacter sp. 2APBS1, complete genomeSOS response UmuD protein3e-1270.9
NC_007508:4476726:448566244856624486141480Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative polymerase V subunit3e-1270.5
NC_009052:4168776:417661141766114177018408Shewanella baltica OS155, complete genomeputative prophage repressor4e-1270.1
NC_015222:2475792:249340424934042494024621Nitrosomonas sp. AL212 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region5e-1269.7
NC_004349:3938:113351133511739405Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceSOS mutagenesis protein RulA1e-1168.9
NC_004459:349500:370238370238370651414Vibrio vulnificus CMCP6 chromosome I, complete sequenceSOS-response transcriptional repressor LexA -like protein1e-1168.6
NC_010334:2615260:262260426226042623011408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein1e-1168.6
NC_016901:5130147:515061851506185151025408Shewanella baltica OS678 chromosome, complete genomepeptidase S24/S26A/S26B2e-1168.2
NC_009665:5072413:509286950928695093276408Shewanella baltica OS185 chromosome, complete genomeputative prophage repressor2e-1168.2
NC_009997:5188221:520999652099965210403408Shewanella baltica OS195, complete genomepeptidase S24 and S26 domain protein2e-1168.2
NC_016863:2324293:233070623307062331209504Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit4e-1167
NC_003197:2327474:233096123309612331431471Salmonella typhimurium LT2, complete genomeDNA polymerase V subunit3e-1167
NC_016810:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit3e-1167
NC_016856:2379027:238251423825142382984471Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit3e-1167
NC_016857:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit3e-1167
NC_011083:2375061:237854823785482379219672Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA polymerase V subunit5e-1166.6
NC_010102:683444:714177714177714848672Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1166.6
NC_016860:2323017:232650423265042327175672Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit UmuD5e-1166.6
NC_010334:2615260:264279526427952643202408Shewanella halifaxensis HAW-EB4, complete genomepeptidase S24 and S26 domain protein1e-1065.1
NC_015740:2998500:300064130006413000970330Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeultraviolet light resistance protein A2e-1064.7
NC_013730:2359939:239184123918412392086246Spirosoma linguale DSM 74, complete genomeSOS-response transcriptional repressors (RecA- mediated autopeptidase)-like protein2e-1064.3
NC_015731:2460248:246163624616362462241606Nitrosomonas sp. Is79A3 chromosome, complete genomepeptidase S24/S26A/S26B4e-1063.5
NC_020418:2868000:288122828812282881533306Morganella morganii subsp. morganii KT, complete genomeError-prone repair protein UmuD4e-1063.5
NC_009436:1141376:115397511539751154361387Enterobacter sp. 638, complete genomeDNA polymerase V subunit1e-0962
NC_015224:4101939:411302441130244113632609Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LexA repressor1e-0962
NC_020211:2123819:213673021367302137125396Serratia marcescens WW4, complete genomeSOS mutagenesis and repair protein UmuD1e-0962
NC_014910:1591003:160300516030051603586582Alicycliphilus denitrificans BC chromosome, complete genomelexa repressor1e-0961.6
NC_011830:2901346:291643429164342917048615Desulfitobacterium hafniense DCB-2, complete genomeSOS-response transcriptional repressor, LexA1e-0961.6
NC_014910:1200605:121068612106861211267582Alicycliphilus denitrificans BC chromosome, complete genomelexa repressor2e-0961.2
NC_010519:796229:820381820381821013633Haemophilus somnus 2336 chromosome, complete genomeLexA repressor6e-0959.7
NC_021182:2667408:267321526732152673826612Clostridium pasteurianum BC1, complete genomeSOS regulatory protein LexA7e-0959.3
NC_007404:1570000:157077515707751571560786Thiobacillus denitrificans ATCC 25259, complete genomepeptidase S24, LexA repressor7e-0959.3
NC_010278:1235934:125094312509431251575633Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,LexA repressor1e-0858.5
NC_011146:603429:607937607937608686750Geobacter bemidjiensis Bem, complete genometranscriptional repressor, LexA family2e-0858.2
NC_002939:47406:511435114351748606Geobacter sulfurreducens PCA, complete genomeLexA repressor4e-0857
NC_014733:1073540:108092910809291081171243Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein5e-0856.6
NC_013939:441921:457651457651458241591Deferribacter desulfuricans SSM1, complete genomeSOS-response transcriptional repressor1e-0755.1
NC_012856:2633890:264250326425032643081579Ralstonia pickettii 12D chromosome 1, complete genomepeptidase S24 and S26 domain protein1e-0755.1
NC_009454:1389974:139878913987891399400612Pelotomaculum thermopropionicum SI, complete genomeSOS-response transcriptional repressors3e-0754.3
NC_017094:1703000:170967817096781710361684Leptospirillum ferrooxidans C2-3, complete genomeLexA repressor3e-0753.9
NC_007973:2150962:215525821552582155914657Ralstonia metallidurans CH34 chromosome 1, complete sequenceSOS-response transcriptional repressor, LexA3e-0753.9
NC_008702:2259430:226421722642172264825609Azoarcus sp. BH72, complete genomerepressor LexA4e-0753.5
NC_015437:1066014:107508110750811075695615Selenomonas sputigena ATCC 35185 chromosome, complete genomeSOS-response transcriptional repressor, LexA4e-0753.5
NC_017986:5605197:563727956372795637887609Pseudomonas putida ND6 chromosome, complete genomeLexA repressor6e-0752.8
NC_016832:948029:979172979172979411240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Protein umuD'6e-0752.8
NC_017046:2026672:203809220380922038331240Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein6e-0752.8
NC_011146:1998981:202611320261132026718606Geobacter bemidjiensis Bem, complete genometranscriptional repressor, LexA family1e-0652
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor1e-0652
NC_014532:2298628:231880823188082319473666Halomonas elongata DSM 2581, complete genomeLexA repressor1e-0651.6
NC_012918:2896671:291377829137782914383606Geobacter sp. M21 chromosome, complete genomeSOS-response transcriptional repressor, LexA2e-0651.6
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor2e-0651.2
NC_013715:1606396:161958916195891620326738Rothia mucilaginosa DY-18, complete genomeSOS-response transcriptional repressor2e-0650.8
NC_007005:2149275:215553921555392155718180Pseudomonas syringae pv. syringae B728a, complete genome3e-0650.8