Pre_GI: BLASTP Hits

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Query: NC_012917:3378759:3392894 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3392894, End: 3393118, Length: 225

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2940539:295886029588602959084225Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1477.8
NC_004088:1510467:151147215114721511696225Yersinia pestis KIM, complete genomehypothetical protein2e-1477.8
NC_003143:3191246:320836332083633208587225Yersinia pestis CO92, complete genomehypothetical protein2e-1477.8
NC_008149:1440371:144137614413761441600225Yersinia pestis Nepal516, complete genomehypothetical protein2e-1477.8
NC_010159:409500:427060427060427284225Yersinia pestis Angola, complete genomehypothetical protein2e-1477.8
NC_005810:3021913:303934430393443039568225Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-1477.8
NC_009381:2491427:250858225085822508806225Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-1477.8
NC_017168:2535732:255282525528252553049225Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-1477.8
NC_010465:1427170:143003114300311430255225Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF14073e-1477.4
NC_006155:3333303:334995233499523350176225Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-1477.4
NC_010634:3250810:326741232674123267636225Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-1477.4
NC_009708:1403434:140443914044391404663225Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-1477.4
NC_013282:3216226:323842232384223238643222Cronobacter turicensis, complete genomeUncharacterized protein yfgJ4e-1166.6
NC_014618:1295322:131197913119791312194216Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein5e-1166.6
NC_009800:2651730:267323926732392673454216Escherichia coli HS, complete genomehypothetical protein5e-1166.6
NC_020063:1194000:119560611956061195824219Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF1407)3e-0960.5
NC_016602:2854107:288020828802082880432225Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein2e-0857.8