Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3242791 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3242791, End: 3243771, Length: 981

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020126:7255111:726127972612797262265987Myxococcus stipitatus DSM 14675, complete genomemandelate racemase/muconate lactonizing enzyme family protein1e-94346
NC_008800:2298000:231396723139672314938972Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative mandelate racemase/muconate lactonizing protein1e-79296
NC_012521:148886:1544261544261554301005Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative dipeptide epimerase6e-78291
NC_015663:4447984:446593144659314466896966Enterobacter aerogenes KCTC 2190 chromosome, complete genomeL-Ala-D/L-Glu epimerase4e-73275
NC_020181:969599:970208970208971173966Enterobacter aerogenes EA1509E, complete genomeL-alanine-DL-glutamate epimerase8e-73274
NC_021066:1778000:179252217925221793487966Raoultella ornithinolytica B6, complete genomeL-Ala-D/L-Glu epimerase7e-71267
NC_012731:2261787:2263456226345622644841029Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeL-Ala-D/L-Glu epimerase2e-69262
NC_004631:1623511:164518116451811646146966Salmonella enterica subsp. enterica serovar Typhi Ty2, completemuconate lactonizing enzyme family protein2e-68259
NC_011094:1726000:174767817476781748643966Salmonella enterica subsp. enterica serovar Schwarzengrund strmandelate racemase / muconate lactonizing enzyme, N- domain-containing protein7e-68257
NC_011080:1750000:177085917708591771824966Salmonella enterica subsp. enterica serovar Newport str. SL254,mandelate racemase / muconate lactonizing enzyme, N- domain protein1e-67256
NC_006905:1766000:178763717876371788602966Salmonella enterica subsp. enterica serovar Choleraesuis strputative chloromuconate cycloisomerase (muconate cycloisomerase)1e-67256
NC_003197:1753663:177450317745031775468966Salmonella typhimurium LT2, complete genomeputative chloromuconate cycloisomerase1e-67256
NC_016810:1709695:173135717313571732322966Salmonella enterica subsp. enterica serovar Typhimurium strputative mandelate racemase / muconate lactonizing enzyme family protein1e-67256
NC_016856:1763640:178448117844811785446966Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative chloromuconate cycloisomerase1e-67256
NC_016857:1709695:173135717313571732322966Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74L-Ala-D/L-Glu epimerase1e-67256
NC_016860:1752000:177219417721941773159966Salmonella enterica subsp. enterica serovar Typhimurium strputative chloromuconate cycloisomerase1e-67256
NC_016863:1711832:173267317326731733638966Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative chloromuconate cycloisomerase1e-67256
NC_017046:1709578:173124017312401732205966Salmonella enterica subsp. enterica serovar Typhimurium str. 798mandelate racemase / muconate lactonizing enzyme family protein1e-67256
NC_009792:1345500:135720813572081358173966Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-66251
NC_018145:104303:117991117991118986996Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completemandelate racemase/muconate lactonizing protein6e-64244
NC_013355:105500:119119119119120114996Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeMandelate racemase/muconate lactonizing protein6e-64244
NC_013421:4790696:481734448173444818312969Pectobacterium wasabiae WPP163, complete genomeMandelate racemase/muconate lactonizing protein3e-58225
NC_003228:3212500:3220355322035532213711017Bacteroides fragilis NCTC 9343, complete genomeputative muconate cycloisomerase8e-29127
NC_015954:1222776:1224258122425812253011044Halophilic archaeon DL31 chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-28125
NC_013440:8405719:8426347842634784273691023Haliangium ochraceum DSM 14365, complete genomeMandelate racemase/muconate lactonizing protein4e-26119
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein3e-22105
NC_003454:63500:9750597505986321128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeO-succinylbenzoate-CoA synthase4e-1995.9
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein8e-1994.7
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase8e-1788.2
NC_013923:45876:4479744797458791083Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceMandelate racemase/muconate lactonizing protein1e-1687.8
NC_012673:77610:9578795787969171131Exiguobacterium sp. AT1b, complete genomeMandelate racemase/muconate lactonizing protein3e-1686.3
NC_017068:1327025:1330760133076013318511092Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative chloromuconate cycloisomerase4e-1685.5
NC_013741:1196997:1199986119998612010651080Archaeoglobus profundus DSM 5631, complete genomeMandelate racemase/muconate lactonizing protein1e-1584
NC_009718:1771500:1784423178442317854511029Fervidobacterium nodosum Rt17-B1, complete genomemandelate racemase/muconate lactonizing protein3e-1375.9
NC_013966:399215:4359574359574370121056Haloferax volcanii DS2 plasmid pHV4, complete sequencemandelate racemase / muconate lactonizing enzyme homolog7e-1375.1
NC_013198:394000:4344884344884356211134Lactobacillus rhamnosus GG, complete genomeenolase superfamily protein, N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme / o-succinylbenzoate synthase3e-1066.2
NC_014973:3690371:3723736372373637248451110Geobacter sp. M18 chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-1065.9
NC_008025:1768756:1785150178515017862381089Deinococcus geothermalis DSM 11300, complete genomeMandelate racemase/muconate lactonizing enzyme-like protein2e-0963.9
NC_015873:238187:2559092559092570031095Megasphaera elsdenii DSM 20460, complete genomemandelate racemase/muconate lactonizing enzyme6e-0962
NC_008699:857837:8769608769608780631104Nocardioides sp. JS614, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein6e-0962
NC_011772:4763542:4776089477608947771951107Bacillus cereus G9842, complete genomeN-acylamino acid racemase6e-0962
NC_014171:4681822:4689194468919446903001107Bacillus thuringiensis BMB171 chromosome, complete genomemandelate racemase/muconate lactonizing family protein7e-0961.6
NC_017093:3777178:3783389378338937844891101Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme-like protein1e-0861.2
NC_014841:131308:1493361493361504481113Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceMandelate racemase/muconate lactonizing protein3e-0859.7
NC_011725:4799905:4806860480686048079661107Bacillus cereus B4264 chromosome, complete genomeN-acylamino acid racemase3e-0859.7
NC_010170:3944228:3958433395843339595451113Bordetella petrii, complete genomeChloromuconate cycloisomerase7e-0858.5
NC_014641:20103:2290822908240201113Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechloromuconate cycloisomerase7e-0858.5
NC_009033:791515:7970957970957982101116Staphylothermus marinus F1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein6e-0858.5
NC_003909:4614789:4620609462060946217151107Bacillus cereus ATCC 10987, complete genomeN-acylamino acid racemase1e-0757.4
NC_011969:4556296:4564242456424245653121071Bacillus cereus Q1 chromosome, complete genomen-acylamino acid racemase; o-succinylbenzoate synthase4e-0755.8
NC_014335:4566692:4574000457400045751061107Bacillus cereus biovar anthracis str. CI chromosome, completeo-succinylbenzoate-CoA synthase5e-0755.5
NC_007337:10464:3120931209324111203Ralstonia eutropha JMP134 plasmid 1, complete sequenceMuconate cycloisomerase5e-0755.5
NC_016771:4569941:4576131457613145772371107Bacillus cereus NC7401, complete genomeN-acylamino acid racemase5e-0755.5
NC_011658:4616933:4622366462236646234721107Bacillus cereus AH187 chromosome, complete genomeN-acylamino acid racemase5e-0755.5
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein1e-0654.3
NC_017200:4632000:4648033464803346491391107Bacillus thuringiensis serovar finitimus YBT-020 chromosome,enolase superfamily protein; N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme, or2e-0653.1
NC_007337:10464:2166921669227811113Ralstonia eutropha JMP134 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme3e-0652.8
NC_002947:4167500:4237124423712442382451122Pseudomonas putida KT2440, complete genomemuconate cycloisomerase4e-0652.4
NC_011002:564654:5676085676085687441137Burkholderia cenocepacia J2315 chromosome 3, complete sequencemuconate cycloisomerase I 27e-0652
NC_010170:1580832:1582665158266515837771113Bordetella petrii, complete genomemuconate cycloisomerase I7e-0651.6
NC_007951:3631772:3651060365106036521721113Burkholderia xenovorans LB400 chromosome 1, complete sequenceChloromuconate cycloisomerase7e-0651.6