Pre_GI: BLASTP Hits

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Query: NC_012917:2971702:2982784 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2982784, End: 2983716, Length: 933

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1873390:193257519325751933540966Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein9e-154543
NC_013421:2004088:201290520129052013831927Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF6 transmembrane2e-148525
NC_017168:2999514:300873330087333009410678Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-79294
NC_008150:2173708:218483321848332185510678Yersinia pestis Antiqua, complete genomehypothetical protein5e-79294
NC_005810:2508671:252294725229472523645699Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-79294
NC_004088:1909880:191811019181101918808699Yersinia pestis KIM, complete genomehypothetical protein6e-79294
NC_003143:2741478:275302327530232753721699Yersinia pestis CO92, complete genomehypothetical protein6e-79294
NC_012778:748143:765024765024765971948Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-50200
NC_013517:3846747:386155138615513862471921Sebaldella termitidis ATCC 33386, complete genomeprotein of unknown function DUF6 transmembrane5e-1582
NC_015856:4975815:499021449902144991116903Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein1e-1274.3
NC_017208:256163:299415299415300335921Bacillus thuringiensis serovar chinensis CT-43 chromosome, completedrug/metabolite exporter family4e-1065.5
NC_014364:2246524:227057922705792271487909Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF6 transmembrane2e-0963.2
NC_003106:1065476:106953010695301070345816Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-0962
NC_014171:261952:309552309552310472921Bacillus thuringiensis BMB171 chromosome, complete genomedrug/metabolite exporter family protein5e-0962
NC_013854:2714033:271529027152902716234945Azospirillum sp. B510, complete genomeABC transporter7e-0961.6
NC_018645:13408:150301503015932903Desulfobacula toluolica Tol2, complete genomehypothetical protein2e-0860.1
NC_021182:2219286:223564422356442236543900Clostridium pasteurianum BC1, complete genomeDMT(drug/metabolite transporter) superfamily permease2e-0860.1
NC_012982:711122:747379747379748287909Hirschia baltica ATCC 49814, complete genomeprotein of unknown function DUF6 transmembrane6e-0858.5
NC_009512:1518113:155092315509231551849927Pseudomonas putida F1, complete genomeprotein of unknown function DUF6, transmembrane1e-0757.8
NC_014973:4503054:450856245085624509521960Geobacter sp. M18 chromosome, complete genomehypothetical protein2e-0757
NC_016902:2361628:236578223657822366681900Escherichia coli KO11FL chromosome, complete genomehypothetical protein3e-0756.2
CP002185:1727493:173917417391741740073900Escherichia coli W, complete genomecysteine and O-acetyl-L-serine efflux system3e-0756.2
CP002516:2361628:236578223657822366681900Escherichia coli KO11, complete genomeprotein of unknown function DUF6 transmembrane3e-0756.2
NC_007181:1963887:196592819659281966755828Sulfolobus acidocaldarius DSM 639, complete genomeArchaeal membrane protein3e-0756.2
NC_010498:1615980:162174816217481622647900Escherichia coli SMS-3-5, complete genomedrug/metabolite exporter family transporter3e-0755.8
NC_016628:1190366:120649312064931207446954Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein4e-0755.8
NC_012559:1635922:164728916472891648176888Laribacter hongkongensis HLHK9, complete genomeprobable transmembrane protein, DMT superfamily5e-0755.5
NC_019962:1875952:1890179189017918911861008Natrinema pellirubrum DSM 15624, complete genomeDMT(drug/metabolite transporter) superfamily permease8e-0754.7
NC_008563:1651270:166442616644261665346921Escherichia coli APEC O1, complete genomeprobable amino acid metabolite efflux pump1e-0654.3
NC_011415:1715644:172732517273251728224900Escherichia coli SE11 chromosome, complete genomeO-acetylserine/cysteine export protein1e-0653.9
NC_009800:1632585:164330516433051644204900Escherichia coli HS, complete genometransporter, 10 TMS drug/metabolite exporter (DME) family1e-0653.9
NC_007493:1672163:171087117108711711836966Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencepossible transporter, DME family, DMT superfamily1e-0653.9
NC_011741:1625535:163721616372161638115900Escherichia coli IAI1 chromosome, complete genomeO-acetylserine/cysteine export protein2e-0653.9
CU928160:1625535:163721616372161638115900Escherichia coli IAI1 chromosome, complete genomecysteine and O-acetyl-L-serine efflux system2e-0653.9
NC_021182:1188000:119757811975781198474897Clostridium pasteurianum BC1, complete genomeDMT(drug/metabolite transporter) superfamily permease3e-0652.8
NC_018644:137755:143540143540144439900Alpha proteobacterium HIMB59 chromosome, complete genomeEamA-like family transporter4e-0652.4
NC_016835:405482:409131409131410054924Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,DMT(drug/metabolite transporter) superfamily permease1e-0551.2