Pre_GI: BLASTP Hits

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Query: NC_012811:1105395:1112140 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 1112140, End: 1112946, Length: 807

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010172:280092:294982294982295788807Methylobacterium extorquens PA1, complete genomeputative restriction endonuclease9e-105379
NC_008686:1472899:148270214827021483478777Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative restriction endonuclease1e-34146
NC_006677:1596560:166093616609361661688753Gluconobacter oxydans 621H, complete genomePutative restriction endonuclease3e-33142
NC_015711:3122000:312514631251463125949804Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-24112
NC_011138:3881446:388994938899493890719771Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein8e-23107
NC_015590:145353:153201153201154082882Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein9e-22103
NC_015572:3091707:309988330998833100662780Methylomonas methanica MC09 chromosome, complete genomehypothetical protein4e-21102
NC_015381:1588742:159024015902401591226987Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein9e-2097.4
NC_020418:116500:121820121820122602783Morganella morganii subsp. morganii KT, complete genomehypothetical protein4e-1892
NC_007952:3196085:321139932113993212238840Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein1e-1790.1
NC_009656:6224221:624468362446836245624942Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1790.1
NC_020064:1962172:197100519710051971904900Serratia marcescens FGI94, complete genomehypothetical protein7e-1684.7
NC_017986:1885613:191158619115861912419834Pseudomonas putida ND6 chromosome, complete genomehypothetical protein7e-1684.3
NC_010002:5143869:515651451565145157449936Delftia acidovorans SPH-1, complete genomehypothetical protein1e-1583.6
NC_007645:5747721:575324057532405753959720Hahella chejuensis KCTC 2396, complete genomepredicted restriction endonuclease4e-1582
NC_007712:2978000:298900229890022989754753Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-1581.6
NC_008322:722612:729171729171730019849Shewanella sp. MR-7, complete genomehypothetical protein7e-1581.3
NC_012856:207194:221844221844222791948Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein3e-1479.3
NC_012778:1819559:1856313185631318574731161Eubacterium eligens ATCC 27750, complete genomeputative restriction endonuclease5e-1478.2
NC_008800:575141:589409589409590173765Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-1377
NC_014638:183115:197199197199197990792Bifidobacterium bifidum PRL2010 chromosome, complete genometype II restriction-modification system restriction subunit2e-1376.3
NC_016510:1749967:175462017546201755393774Flavobacterium columnare ATCC 49512 chromosome, complete genomerestriction endonuclease2e-1376.3
NC_008618:1526392:153285015328501533620771Bifidobacterium adolescentis ATCC 15703, complete genomepossible restriction endonuclease2e-1376.3
NC_015224:610807:622685622685623449765Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-1376.3
NC_017218:273503:280906280906281694789Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein2e-1375.9
NC_014169:231210:238629238629239417789Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease2e-1375.9
NC_015761:4355335:435922743592274360006780Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-1375.9
NC_010995:4460413:447291044729104473668759Cellvibrio japonicus Ueda107, complete genomehypothetical protein3e-1375.5
NC_012731:600518:628576628576629355780Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative restriction endonuclease6e-1374.7
NC_009648:5119271:514226151422615143040780Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein6e-1374.7
NC_009792:3225965:324036632403663241145780Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-1374.7
NC_014923:2888723:289292728929272893922996Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehypothetical protein8e-1374.3
NC_017150:2383361:239096123909612391923963Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein1e-1273.6
NC_013209:2476039:248321524832152484177963Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein1e-1273.6
NC_017100:2476822:248442224844222485384963Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein1e-1273.6
NC_017108:2474583:248175924817592482721963Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein1e-1273.6
NC_017111:2474601:248177724817772482739963Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein1e-1273.6
NC_017121:2474588:248176424817642482726963Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein1e-1273.6
NC_017125:2476802:248440224844022485364963Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein1e-1273.6
NC_017146:2476844:248444424844442485406963Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein1e-1273.6
NC_015436:1287873:130861913086191309524906Spirochaeta coccoides DSM 17374 chromosome, complete genomehypothetical protein4e-1272
NC_013410:2586500:2593159259315925942141056Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein7e-1271.2
NC_008529:1042220:105313110531311053916786Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted restriction endonuclease3e-1168.9
NC_020063:4127161:413034841303484131286939Enterobacteriaceae bacterium strain FGI 57, complete genomeputative restriction endonuclease8e-1167.8
NC_014033:772754:784512784512785339828Prevotella ruminicola 23 chromosome, complete genomehypothetical protein9e-1167.4
NC_014366:2703226:272242027224202722923504Gamma proteobacterium HdN1, complete genomehypothetical protein4e-1065.1
NC_011059:65414:693516935170124774Prosthecochloris aestuarii DSM 271, complete genomeputative restriction endonuclease2e-0963.2
NC_017514:1396000:1406950140695014080681119Neisseria meningitidis M01-240149 chromosome, complete genometype II restriction enzyme6e-0961.6
NC_017512:760000:7668387668387679561119Neisseria meningitidis WUE 2594, complete genomeputative type II restriction-modification system enzyme Res6e-0961.2
NC_014752:1530000:1542116154211615432461131Neisseria lactamica ST-640, complete genometype II restriction endonuclease7e-0961.2
NC_017516:1439775:1452890145289014539211032Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein1e-0860.5
NC_017515:1429317:1441918144191814429491032Neisseria meningitidis M04-240196 chromosome, complete genome1e-0860.5
NC_017517:867595:8756538756538766841032Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein1e-0860.5
NC_010120:788000:7953027953027964201119Neisseria meningitidis 053442, complete genometype II restriction endonuclease2e-0859.7
NC_009665:3869904:388223138822313883046816Shewanella baltica OS185 chromosome, complete genomehypothetical protein3e-0859.3
NC_003116:988000:9960239960239971411119Neisseria meningitidis Z2491, complete genometype II restriction endonuclease6e-0858.2
NC_020156:1565500:158153715815371582511975Nonlabens dokdonensis DSW-6, complete genomeHNH endonuclease family protein7e-0857.8
NC_019792:2524130:256348725634872564287801Natronobacterium gregoryi SP2 chromosome, complete genomehypothetical protein3e-0755.8
NC_015136:2021799:202910520291052029803699Burkholderia sp. CCGE1001 chromosome 1, complete sequenceHNH nuclease6e-0754.7
NC_012490:4425456:443253844325384433425888Rhodococcus erythropolis PR4, complete genomehypothetical protein1e-0653.9
NC_017093:8518961:853191985319198532890972Actinoplanes missouriensis 431, complete genomehypothetical protein1e-0653.5
NC_021177:2034722:2041848204184820429151068Streptomyces fulvissimus DSM 40593, complete genomeputative restriction endonuclease6e-0651.6